Evidence map›Paper›PMID 37404016›Full record

Observational studymSphere2023

Development of the intestinal microbiome in cystic fibrosis in early life.

Courtney E Price, Thomas H Hampton, Rebecca A Valls, Kaitlyn E Barrack, George A O'Toole, Juliette C Madan, Modupe O Coker

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in mSphere, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Observational
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. IntestinalmBio · 2024
    Article
  17. AnJournal of bacteriology · 2024
    Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Courtney E PriceDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth , Hanover, New Hampshire, USA.ORCID 0000-0001-8003-2253
Thomas H HamptonDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth , Hanover, New Hampshire, USA.ORCID 0000-0003-0543-402X
Rebecca A VallsDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth , Hanover, New Hampshire, USA.
Kaitlyn E BarrackDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth , Hanover, New Hampshire, USA.
George A O'TooleDepartment of Microbiology and Immunology, Geisel School of Medicine at Dartmouth , Hanover, New Hampshire, USA.ORCID 0000-0002-2861-4392
Juliette C Madan *Department of Pediatrics, Children's Hospital at Dartmouth, Dartmouth Health , Lebanon, New Hampshire, USA.
Modupe O Coker *Department of Epidemiology, Geisel School of Medicine at Dartmouth , Hanover, New Hampshire, USA.ORCID 0000-0002-9072-7953
Dartmouth College · USRutgers, The State University of New Jersey · US

Funding

Translational Research CoreP30DK117469 · NIDDK · DARTMOUTH COLLEGE · PI DEBORAH A HOGAN · 2018 to 2026
$13.9M
IMMUNOBIOLOGY OF MYELOID AND LYMPHOID CELLST32AI007363 · NIAID · DARTMOUTH COLLEGE · PI Claudia V Jakubzick · 1990 to 2026
$9.5M
Oral Microbiomes and Dental Caries in a Human Immunodeficiency Virus Infected PopulationR01DE028154 · NIDCR · CLEMSON UNIVERSITY · PI COKER, MODUPE, RICHARDS, VINCENT · 2018 to 2022
$2.1M
Dartmouth Cystic Fibrosis Training ProgramT32HL134598 · NHLBI · DARTMOUTH COLLEGE · PI George A. O'Toole · 2017 to 2026
$1.7M
NHLBI NIH HHS T32 HL134598NIAID NIH HHS T32 AI007363NIDCR NIH HHS R01 DE028154NIDDK NIH HHS P30 DK117469
6 · The paper itself

Abstract

Cystic fibrosis (CF) is a heritable disease that causes altered physiology at mucosal sites; these changes result in chronic infections in the lung, significant gastrointestinal complications as well as dysbiosis of the gut microbiome, although the latter has been less well explored. Here, we describe the longitudinal development of the gut microbiome in a cohort of children with CF (cwCF) from birth through early childhood (0-4 years of age) using 16S rRNA gene amplicon sequencing of stool samples as a surrogate for the gut microbiota. Similar to healthy populations, alpha diversity of the gut microbiome increases significantly with age, but diversity plateaus at ~2 years of age for this CF cohort. Several taxa that have been associated with dysbiosis in CF change with age toward a more healthy-like composition; notable exceptions include

Indexed as

Cystic FibrosisGastrointestinal MicrobiomeInflammatory Bowel DiseasesChildChild, PreschoolDysbiosisHumansInfant, NewbornRNA, Ribosomal, 16SRNA, Ribosomal, 16SCrohn’s diseasecystic fibrosisgutmicrobiome

Identifiers

PMID37404016
PMCPMC10449510
OpenAlexW4383186614

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.