Evidence map›Paper›PMID 37403515›Full record

ArticleMolecular plant pathology2023

A novel tomato spotted wilt virus isolate encoding a noncanonical NSm C118F substitution associated with Sw-5 tomato gene resistance breaking.

Edgar Antonio Rodríguez-Negrete, Enrique Alejandro Guevara-Rivera, Ángela Paulina Arce-Leal, Norma Elena Leyva-López, Jesús Méndez-Lozano

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Article in Molecular plant pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
6.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Edgar Antonio Rodríguez-NegreteInstituto Politécnico Nacional, CIIDIR-Sinaloa, Guasave, Mexico.ORCID 0000-0003-1233-5396
Enrique Alejandro Guevara-RiveraInstituto Politécnico Nacional, CIIDIR-Sinaloa, Guasave, Mexico.ORCID 0009-0006-4686-9635
Ángela Paulina Arce-LealInstituto Politécnico Nacional, CIIDIR-Sinaloa, Guasave, Mexico.ORCID 0009-0005-8864-5202
Norma Elena Leyva-LópezInstituto Politécnico Nacional, CIIDIR-Sinaloa, Guasave, Mexico.ORCID 0000-0001-7139-480X
Jesús Méndez-LozanoInstituto Politécnico Nacional, CIIDIR-Sinaloa, Guasave, Mexico.ORCID 0000-0002-2077-3612
Instituto Politécnico Nacional · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nonstructural protein NSm of tomato spotted wilt virus (TSWV) has been identified as the avirulence determinant of the tomato single dominant Sw-5 resistance gene. Although Sw-5 effectiveness has been shown for most TSWV isolates, the emergence of resistance-breaking (RB) isolates has been observed. It is strongly associated with two point mutations (C118Y or T120N) in the NSm viral protein. TSWV-like symptoms were observed in tomato crop cultivars (+Sw-5) in the Baja California peninsula, Mexico, and molecular methods confirmed the presence of TSWV. Sequence analysis of the NSm 118-120 motif and three-dimensional protein modelling exhibited a noncanonical C118F substitution in seven isolates, suggesting that this substitution could emulate the C118Y-related RB phenotype. Furthermore, phylogenetic and molecular analysis of the full-length genome (TSWV-MX) revealed its reassortment-related evolution and confirmed that putative RB-related features are restricted to the NSm protein. Biological and mutational NSm 118 residue assays in tomato (+Sw-5) confirmed the RB nature of TSWV-MX isolate, and the F118 residue plays a critical role in the RB phenotype. The discovery of a novel TSWV-RB Mexican isolate with the presence of C118F substitution highlights a not previously described viral adaptation in the genus Orthotospovirus, and hence, the necessity of further crop monitoring to alert the establishment of novel RB isolates in cultivated tomatoes.

Indexed as

Solanum lycopersicumTospovirusMexicoMutationPhylogenyPlant Diseasesnonstructural protein (NSm)resistance-breaking associated NSm 118-120 motiftomato spotted wilt virustomato Sw-5 resistance gene

Identifiers

PMID37403515
PMCPMC10502823
OpenAlexW4383187333

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.