Evidence map›Paper›PMID 37403226›Full record

ArticleExperimental neurobiology2023

An Automated Cell Detection Method for TH-positive Dopaminergic Neurons in a Mouse Model of Parkinson's Disease Using Convolutional Neural Networks.

Doyun Kim, Myeong Seong Bak, Haney Park, In Seon Baek, Geehoon Chung, Jae Hyun Park, Sora Ahn, Seon-Young Park, Hyunsu Bae, Hi-Joon Park and 1 more

Open access · diamondAbstract read
In one paragraph

Article in Experimental neurobiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 9 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 1 institution in 1 country.

Doyun KimDepartment of Physiology, College of Korean Medicine, Kyung Hee University, Seoul 02447, Korea.
Myeong Seong BakDepartment of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul 02447, Korea.
Haney ParkDepartment of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul 02447, Korea.
In Seon BaekDepartment of Science in Korean Medicine, Graduate School, Kyung Hee University, Seoul 02447, Korea.
Geehoon ChungDepartment of Physiology, College of Korean Medicine, Kyung Hee University, Seoul 02447, Korea.
Jae Hyun ParkDepartment of East-West Medicine, Graduate School, Kyung Hee University, Seoul 02447, Korea.
Sora AhnAcupuncture & Meridian Science Research Center, Kyung Hee University, Seoul 02447, Korea.
Seon-Young ParkDepartment of Physiology, College of Korean Medicine, Kyung Hee University, Seoul 02447, Korea.
Hyunsu BaeDepartment of Physiology, College of Korean Medicine, Kyung Hee University, Seoul 02447, Korea.
Hi-Joon ParkAcupuncture & Meridian Science Research Center, Kyung Hee University, Seoul 02447, Korea.
Sun Kwang KimDepartment of Physiology, College of Korean Medicine, Kyung Hee University, Seoul 02447, Korea.
Kyung Hee University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantification of tyrosine hydroxylase (TH)-positive neurons is essential for the preclinical study of Parkinson's disease (PD). However, manual analysis of immunohistochemical (IHC) images is labor-intensive and has less reproducibility due to the lack of objectivity. Therefore, several automated methods of IHC image analysis have been proposed, although they have limitations of low accuracy and difficulties in practical use. Here, we developed a convolutional neural network-based machine learning algorithm for TH+ cell counting. The developed analytical tool showed higher accuracy than the conventional methods and could be used under diverse experimental conditions of image staining intensity, brightness, and contrast. Our automated cell detection algorithm is available for free and has an intelligible graphical user interface for cell counting to assist practical applications. Overall, we expect that the proposed TH+ cell counting tool will promote preclinical PD research by saving time and enabling objective analysis of IHC images.

Indexed as

Cell countDeep learningDopaminergic neuronsMiceNeural networksParkinson’s disease

Identifiers

PMID37403226
PMCPMC10327927
OpenAlexW4383186306

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.