Evidence map›Paper›PMID 37401028›Full record

ArticleRNA biology2023

Characteristics of Human and Microbiome RNA Profiles in Saliva.

Fangjia Tong, Gongyu Tang, Xiaowei Wang

Open access · goldAbstract read
In one paragraph

Article in RNA biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Viroid-like colonists of human microbiomes.bioRxiv : the preprint server for biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 1 country.

Fangjia TongDepartment of Pharmacology and Regenerative Medicine, University of Illinois at Chicago, Chicago, IL, USA.
Gongyu TangDepartment of Pharmacology and Regenerative Medicine, University of Illinois at Chicago, Chicago, IL, USA.
Xiaowei WangDepartment of Pharmacology and Regenerative Medicine, University of Illinois at Chicago, Chicago, IL, USA.
University of Illinois Chicago · USUniversity of Illinois System · USWashington University in St. Louis · US

Funding

MICRORNA BIOMARKERS FOR OROPHARYNGEAL CANCERR01DE026471 · NIDCR · WASHINGTON UNIVERSITY · PI WANG, XIAOWEI · 2017 to 2021
$2.2M
Combined Computational and Experimental Analyses of Gene Regulation by MicroRNAsR35GM141535 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI WANG, XIAOWEI · 2021 to 2025
$2.1M
NIDCR NIH HHS R01 DE026471NIGMS NIH HHS R35 GM141535
6 · The paper itself

Abstract

Saliva is a convenient non-invasive source of liquid biopsy to monitor human health and diagnose diseases. In particular, extracellular vesicles (EVs) in saliva can potentially reveal clinically relevant information for systemic health. Recent studies have shown that RNA in saliva EVs could be exploited as biomarkers for disease diagnosis. However, there is no standardized protocol for profiling RNA in saliva EV nor clear guideline on selecting saliva fractions for biomarker analysis. To address these issues, we established a robust protocol for small RNA profiling from fractionated saliva. With this method, we performed comprehensive small RNA sequencing of four saliva fractions, including cell-free saliva (CFS), EV-depleted saliva (EV-D), exosome (EXO), and microvesicle (MV) from ten healthy volunteers. By comparing the expression profiles of total RNA from these fractions, we found that MV was most enriched in microbiome RNA (76.2% of total reads on average), whereas EV-D was notably enriched in human RNA (70.3% of total reads on average). As for human RNA composition, CFS and EV-D were both enriched in snoRNA and tRNA compared with the two EV fractions (EXO and MV,

Indexed as

ExosomesExtracellular VesiclesMicroRNAsBiomarkersHumansSalivaBiomarkersMicroRNAsexosomemicrobiomemicrovesiclesalivaSmall RNA-seq

Identifiers

PMID37401028
PMCPMC10321209
OpenAlexW4383058390

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.