Evidence map›Paper›PMID 37399500›Full record

ReviewAmerican journal of physiology. Cell physiology2023

V3: an enigmatic isoform of the proteoglycan versican.

Thomas N Wight, Anthony J Day, Inkyung Kang, Ingrid A Harten, Gernot Kaber, David C Briggs, Kathleen R Braun, Joan M Lemire, Michael G Kinsella, Aleksander Hinek and 1 more

Open access · greenAbstract readReview
In one paragraph

Review in American journal of physiology. Cell physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
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  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 4 countries.

Thomas N WightMatrix Biology Program, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.ORCID 0000-0002-2794-4197
Anthony J DayWellcome Centre for Cell-Matrix Research, Faculty of Biology, Medicine and Health, University of Manchester, Manchester Academic Health Sciences Centre, Manchester, United Kingdom.
Inkyung KangMatrix Biology Program, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.
Ingrid A HartenMatrix Biology Program, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.
Gernot KaberMatrix Biology Program, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.
David C BriggsSignalling and Structural Biology Laboratory, The Francis Crick Institute, London, United Kingdom.ORCID 0000-0002-9793-7339
Kathleen R BraunMatrix Biology Program, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.
Joan M LemireDepartment of Biology, Tufts University, Medford, Massachusetts, United States.
Michael G KinsellaMatrix Biology Program, Benaroya Research Institute at Virginia Mason, Seattle, Washington, United States.
Aleksander HinekTranslational Medicine, Hospital for Sick Children, Toronto, Ontario, Canada.
Mervyn J MerrileesDepartment of Anatomy and Medical Imaging, University of Auckland, Auckland, New Zealand.
Virginia Mason Medical Center · USHospital for Sick Children · CAManchester Academic Health Science Centre · GBThe Francis Crick Institute · GBTufts University · USUniversity of Auckland · NZ

Funding

Regulation of the Innate Immune Response by the Epithelium in AsthmaU19AI125378 · NIAID · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI ZIEGLER, STEVEN F · 2016 to 2020
$9.2M
Regulation of Allergen-Induced Airway Pathophysiology by VersicanR01AI130280 · NIAID · UNIVERSITY OF WASHINGTON · PI FREVERT, CHARLES WAYNE, HALLSTRAND, TEAL S · 2019 to 2023
$3.8M
Lymph Node Extracellular Matrix in Antigen Presentation and Immune RegulationR01DK096087 · NIDDK · STANFORD UNIVERSITY · PI BOLLYKY, PAUL L · 2012 to 2021
$3.4M
Engineering vascular replacements for strength and elasticityR01EB012558 · NIBIB · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI VERNON, ROBERT B, WIGHT, THOMAS N · 2011 to 2014
$2.3M
Targeting the Extracellular Matrix to Inhibit Saphenous Vein Graft (SVG) FailureR41HL106967 · NHLBI · MATREXA, LLC · PI WIGHT, THOMAS N · 2011 to 2012
$677k
Medical Research Council 76445Medical Research Council G0501816NHLBI NIH HHS R41 HL106967NIAID NIH HHS R01 AI130280NIAID NIH HHS U19 AI125378NIBIB NIH HHS R01 EB012558NIDDK NIH HHS R01 DK096087Versus Arthritis 14871Versus Arthritis 16539Versus Arthritis 18472
6 · The paper itself

Abstract

V3 is an isoform of the extracellular matrix (ECM) proteoglycan (PG) versican generated through alternative splicing of the versican gene such that the two major exons coding for sequences in the protein core that support chondroitin sulfate (CS) glycosaminoglycan (GAG) chain attachment are excluded. Thus, versican V3 isoform carries no GAGs. A survey of PubMed reveals only 50 publications specifically on V3 versican, so it is a very understudied member of the versican family, partly because to date there are no antibodies that can distinguish V3 from the CS-carrying isoforms of versican, that is, to facilitate functional and mechanistic studies. However, a number of in vitro and in vivo studies have identified the expression of the V3 transcript during different phases of development and in disease, and selective overexpression of V3 has shown dramatic phenotypic effects in "gain and loss of function" studies in experimental models. Thus, we thought it would be useful and instructive to discuss the discovery, characterization, and the putative biological importance of the enigmatic V3 isoform of versican.

Indexed as

Alternative SplicingVersicansExtracellular MatrixHumansProtein IsoformsProtein IsoformsVCAN protein, humanVersicansatherosclerosiscell proliferationhyaluronaninflammationversican

Identifiers

PMID37399500
PMCPMC10511178
OpenAlexW4382932665

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.