Evidence map›Paper›PMID 37399247›Full record

ArticlePlant physiology2023

Transcription factors TgbHLH95 and TgbZIP44 cotarget terpene biosynthesis gene TgGPPS in Torreya grandis nuts.

Zuying Zhang, Liu Tao, Lingling Gao, Yadi Gao, Jinwei Suo, Weiyu Yu, Yuanyuan Hu, Chunyan Wei, Mohamed A Farag, Jiasheng Wu and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Zuying ZhangState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.ORCID 0000-0001-6602-5559
Liu TaoState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.ORCID 0000-0003-3367-7731
Lingling GaoState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.ORCID 0009-0009-5844-7474
Yadi GaoState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.ORCID 0000-0002-3513-4477
Jinwei SuoState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.
Weiyu YuState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.
Yuanyuan HuState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.
Chunyan WeiZhejiang Academy of Agricultural Sciences, Institute of Horticulture, Desheng Middle Road No. 298, Hangzhou, 310021 Zhejiang Province, China.ORCID 0000-0002-7192-9947
Mohamed A FaragPharmacognosy Department, College of Pharmacy, Cairo University, Kasr el Aini st., Cairo 11562, Egypt.ORCID 0000-0001-5139-1863
Jiasheng WuState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.ORCID 0000-0002-2515-4677
Lili SongState Key Laboratory of Subtropical Silviculture, Zhejiang A&F University, Lin'an, 311300 Zhejiang Province, China.ORCID 0000-0002-9599-4591
Zhejiang A & F University · CNCairo University · EGZheJiang Academy of Agricultural Sciences · CN

Funding

Launching Funds for Zhejiang A&F University 2021FR019National Natural Science Foundation of China 32101556Zhejiang Forestry Science and Technology Project 2022B04Zhejiang Province Key R&D Project 2020C02019Zhejiang Provincial Cooperative Forestry Science and Technology Project 2019SY07
6 · The paper itself

Abstract

Terpenes are volatile compounds responsible for aroma and the postharvest quality of commercially important xiangfei (Torreya grandis) nuts, and there is interest in understanding the regulation of their biosynthesis. Here, a transcriptomics analysis of xiangfei nuts after harvest identified 156 genes associated with the terpenoid metabolic pathway. A geranyl diphosphate (GPP) synthase (TgGPPS) involved in production of the monoterpene precursor GPP was targeted for functional characterization, and its transcript levels positively correlated with terpene levels. Furthermore, transient overexpression of TgGPPS in tobacco (Nicotiana tabacum) leaves or tomato (Solanum lycopersicum) fruit led to monoterpene accumulation. Analysis of differentially expressed transcription factors identified one basic helix-loop-helix protein (TgbHLH95) and one basic leucine zipper protein (TgbZIP44) as potential TgGPPS regulators. TgbHLH95 showed significant transactivation of the TgGPPS promoter, and its transient overexpression in tobacco leaves led to monoterpene accumulation, whereas TgbZIP44 directly bound to an ACGT-containing element in the TgGPPS promoter, as determined by yeast 1-hybrid test and electrophoretic mobility shift assay. Bimolecular fluorescence complementation, firefly luciferase complementation imaging, co-immunoprecipitation, and GST pull-down assays confirmed a direct protein-protein interaction between TgbHLH95 and TgbZIP44 in vivo and in vitro, and in combination these proteins induced the TgGPPS promoter up to 4.7-fold in transactivation assays. These results indicate that a TgbHLH95/TgbZIP44 complex activates the TgGPPS promoter and upregulates terpene biosynthesis in xiangfei nuts after harvest, thereby contributing to its aroma.

Indexed as

TaxaceaeTranscription FactorsGene Expression Regulation, PlantMonoterpenesNutsPlant ProteinsTerpenesMonoterpenesPlant ProteinsTerpenesTranscription Factors

Identifiers

PMID37399247
PMCPMC10517253
OpenAlexW4382931687

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.