Evidence map›Paper›PMID 37398083›Full record

ArticlemedRxiv : the preprint server for health sciences2023

An Early Adverse Drug Event Detection Approach with False Discovery Rate Control.

Yi Shi, Xueqiao Peng, Ruoqi Liu, Anna Sun, Yuedi Yang, Ping Zhang, Pengyue Zhang

Abstract readPreprint
In one paragraph

Article in medRxiv : the preprint server for health sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yi ShiDepartment of Biostatistics and Health Data Science, Indiana University, Indianapolis, Indiana, USA.
Xueqiao PengDepartment of Computer Science and Engineering, the Ohio State University, Columbus, Ohio, USA.
Ruoqi LiuDepartment of Computer Science and Engineering, the Ohio State University, Columbus, Ohio, USA.
Anna SunDepartment of Biostatistics and Health Data Science, Indiana University, Indianapolis, Indiana, USA.
Yuedi YangDepartment of Biostatistics and Health Data Science, Indiana University, Indianapolis, Indiana, USA.
Ping ZhangDepartment of Computer Science and Engineering, the Ohio State University, Columbus, Ohio, USA.
Pengyue ZhangDepartment of Biostatistics and Health Data Science, Indiana University, Indianapolis, Indiana, USA.

Funding

A Statistical Network Pharmacology Approach for Early Detection of Adverse Drug EventsR01GM141279 · NIGMS · OHIO STATE UNIVERSITY · PI ZHANG, PENGYUE, ZHANG, PING · 2021 to 2023
$937k
NIGMS NIH HHS R01 GM141279
6 · The paper itself

Abstract

Adverse drug event (ADE) is a significant challenge in clinical practice. Many ADEs have not been identified timely after the approval of the corresponding drugs. Despite the use of drug similarity network demonstrates early success on improving ADE detection, false discovery rate (FDR) control remains unclear in its application. Additionally, performance of early ADE detection has not been explicitly investigated under the time-to-event framework. In this manuscript, we propose to use the drug similarity based posterior probability of null hypothesis for early ADE detection. The proposed approach is also able to control FDR for monitoring a large number of ADEs of multiple drugs. The proposed approach outperforms existing approaches on mining labeled ADEs in the US FDA's Adverse Event Reporting System (FAERS) data, especially in the first few years after the drug initial reporting time. Additionally, the proposed approach is able to identify more labeled ADEs and has significantly lower time to ADE detection. In simulation study, the proposed approach demonstrates proper FDR control, as well as has better true positive rate and an excellent true negative rate. In our exemplified FAERS analysis, the proposed approach detects new ADE signals and identifies ADE signals in a timelier fashion than existing approach. In conclusion, the proposed approach is able to both reduce the time and improve the FDR control for ADE detection.

Identifiers

PMID37398083
PMCPMC10312832

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.