Evidence map›Paper›PMID 37398042›Full record

ArticleResearch square2023

Functional Architecture of Brain and Blood Transcriptome Delineate Biological Continuity Between Suicidal Ideation and Suicide.

Shengnan Sun, Qingkun Liu, Zhaoyu Wang, Yung-Yu Huang, M Sublette, Andrew Dwork, Gorazd Rosoklija, Yongchao Ge, Hanga Galfalvy, J John Mann and 1 more

Open access · greenAbstract readPreprint
In one paragraph

Article in Research square, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shengnan SunColumbia University.
Qingkun LiuColumbia University.
Zhaoyu WangColumbia University.
Yung-Yu HuangColumbia University.
M SubletteColumbia University.
Andrew DworkIcahn School of Medicine at Mount Sinai.
Gorazd RosoklijaIcahn School of Medicine at Mount Sinai.
Yongchao GeIcahn School of Medicine at Mount Sinai.
Hanga GalfalvyIcahn School of Medicine at Mount Sinai.ORCID 0000-0001-7156-6106
J John MannIcahn School of Medicine at Mount Sinai.
Fatemeh HaghighiIcahn School of Medicine at Mount Sinai.
Icahn School of Medicine at Mount Sinai · USColumbia University · US

Funding

Suicidal Behavior: Aggression Subtypes, Childhood Adversity and Stress ResponseP50MH090964 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI MANN, JOSEPH JOHN · 2013 to 2022
$23.6M
DNA Methylation and Inflammatory Signatures Associated with Suicide Risk and Treatment in US VeteransI01CX001395 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HAGHIGHI, FATEMEH G · 2017 to 2023
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Identifying Bio-signatures of Suicidal Subtypes in VeteransI01CX001728 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HAGHIGHI, FATEMEH G · 2019 to 2023
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Neuroinflammatory and Epigenetic Mechanisms of Blood-Brain Barrier Compromise in SuicideI01BX003794 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HAGHIGHI, FATEMEH G · 2018 to 2024
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Identifying DNA Methylation Alterations of Chronic Effects Of Blast and Disturbed SleepI01RX003818 · VA · JAMES J PETERS VA MEDICAL CENTER · PI FATEMEH G HAGHIGHI · 2022 to 2026
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CSR&D Research Career Scientist Award ApplicationIK6CX002074 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HAGHIGHI, FATEMEH G · 2020 to 2025
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Epigenetic Mechanisms in Blast Related Traumatic Brain InjuryI01RX001705 · VA · JAMES J PETERS VA MEDICAL CENTER · PI HAGHIGHI, FATEMEH G · 2016 to 2022
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BLRD VA I01 BX003794CSRD VA I01 CX001395CSRD VA I01 CX001728CSRD VA IK6 CX002074NIMH NIH HHS P50 MH090964RRD VA I01 RX001705RRD VA I01 RX003818
6 · The paper itself

Abstract

Human genetic studies indicate that suicidal ideation and behavior are both heritable. Most studies have examined associations between aberrant gene expression and suicide behavior, but behavior risk is linked to severity of suicidal ideation. Through a gene network approach, this study investigates how gene co-expression patterns are associated with suicidal ideation and severity using RNA-seq data in peripheral blood from 46 live participants with elevated suicidal ideation and 46 with no ideation. Associations with presence and severity of suicidal ideation were found within 18 and 3 co-expressed modules respectively (p < 0.05), not explained by severity of depression. Suicidal ideation presence and severity-related gene modules with enrichment of genes involved in defense against microbial infection, inflammation, and adaptive immune response were identified, and tested using RNA-seq data from postmortem brain that revealed gene expression differences in suicide decedents vs. non-suicides in white matter, but not gray matter. Findings support a role of brain and peripheral blood inflammation in suicide risk, showing that suicidal ideation presence and severity is associated with an inflammatory signature detectable in blood and brain, indicating a biological continuity between ideation and suicidal behavior that may underlie a common heritability.

Identifiers

PMID37398042
PMCPMC10312911
OpenAlexW4378977727

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.