Evidence map›Paper›PMID 37396609›Full record

ArticleArXiv2023

Second Sight: Using brain-optimized encoding models to align image distributions with human brain activity.

Reese Kneeland, Jordyn Ojeda, Ghislain St-Yves, Thomas Naselaris

Open access · greenAbstract readPreprint
In one paragraph

Article in ArXiv, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 0 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Reese KneelandDepartment of Computer Science, University of Minnesota, Minneapolis MN, 55455.
Jordyn OjedaDepartment of Computer Science, University of Minnesota, Minneapolis MN, 55455.
Ghislain St-YvesDepartment of Neuroscience, University of Minnesota, Minneapolis MN, 55455.
Thomas NaselarisDepartment of Neuroscience, University of Minnesota, Minneapolis MN, 55455.
University of Minnesota · US

Funding

Seen and mental images in visual cortexR01EY023384 · NEI · UNIVERSITY OF MINNESOTA · PI HERMES, DORA, NASELARIS, THOMAS P · 2014 to 2025
$3.4M
NEI NIH HHS R01 EY023384
6 · The paper itself

Abstract

Two recent developments have accelerated progress in image reconstruction from human brain activity: large datasets that offer samples of brain activity in response to many thousands of natural scenes, and the open-sourcing of powerful stochastic image-generators that accept both low- and high-level guidance. Most work in this space has focused on obtaining point estimates of the target image, with the ultimate goal of approximating literal pixel-wise reconstructions of target images from the brain activity patterns they evoke. This emphasis belies the fact that there is always a family of images that are equally compatible with any evoked brain activity pattern, and the fact that many image-generators are inherently stochastic and do not by themselves offer a method for selecting the single best reconstruction from among the samples they generate. We introduce a novel reconstruction procedure (Second Sight) that iteratively refines an image distribution to explicitly maximize the alignment between the predictions of a voxel-wise encoding model and the brain activity patterns evoked by any target image. We use an ensemble of brain-optimized deep neural networks trained on the Natural Scenes Dataset (NSD) as our encoding model, and a latent diffusion model as our image generator. At each iteration, we generate a small library of images and select those that best approximate the measured brain activity when passed through our encoding model. We extract semantic and structural guidance from the selected images, used for generating the next library. We show that this process converges on a distribution of high-quality reconstructions by refining both semantic content and low-level image details across iterations. Images sampled from these converged image distributions are competitive with state-of-the-art reconstruction algorithms. Interestingly, the time-to-convergence varies systematically across visual cortex, with earlier visual areas generally taking longer and converging on narrower image distributions, relative to higher-level brain areas. Second Sight thus offers a succinct and novel method for exploring the diversity of representations across visual brain areas.

Identifiers

PMID37396609
PMCPMC10312906
OpenAlexW4382918686

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.