Evidence map›Paper›PMID 37395176›Full record

ArticleAging cell2023

Chromosome-level Asian elephant genome assembly and comparative genomics of long-lived mammals reveal the common substitutions for cancer resistance.

Xuanjing Li, Pengcheng Wang, Qi Pan, Gaoming Liu, Weiqiang Liu, Olatunde Omotoso, Juan Du, Zihao Li, Yang Yu, Yun Huang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Aging cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Myosin-5a facilitates stress granule formation by interacting with G3BP1.Cellular and molecular life sciences : CMLS · 2024
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 1 country.

Xuanjing LiCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.ORCID 0000-0002-1277-4922
Pengcheng WangCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Qi PanCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Gaoming LiuCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Weiqiang LiuCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Olatunde OmotosoCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Juan DuCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Zihao LiCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Yang YuDivision of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China.
Yun HuangDivision of Life Sciences and Medicine, University of Science and Technology of China, Hefei, China.
Pingfen ZhuCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Meng LiCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.
Xuming ZhouCAS Key Laboratory of Animal Ecology and Conservation Biology, Institute of Zoology, Beijing, China.ORCID 0000-0002-1100-6294
University of Chinese Academy of Sciences · CNInstitute of Zoology · CNUniversity of Science and Technology of China · CNNanjing Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The naked mole rat (Heterocephalus glaber), bats (e.g., genus Myotis), and elephants (family Elephantidae) are known as long-lived mammals and are assumed to be excellent cancer antagonists. However, whether there are common genetic changes underpinning cancer resistance in these long-lived species is yet to be fully established. Here, we newly generated a high-quality chromosome-level Asian elephant (Elephas maximus) genome and identified that the expanded gene families in elephants are involved in Ras-associated and base excision repair pathways. Moreover, we performed comparative genomic analyses of 12 mammals and examined genes with signatures of positive selection in elephants, naked mole rat, and greater horseshoe bat. Residues at positively selected sites of CDR2L and ALDH6A1 in these long-lived mammals enhanced the inhibition of tumor cell migration compared to those in short-lived relatives. Overall, our study provides a new genome resource and a preliminary survey of common genetic changes in long-lived mammals.

Indexed as

ElephantsNeoplasmsAnimalsChromosomesGenomicsMammalsMole Ratscancer resistancecomparative genomicselephantslong-lived mammals

Identifiers

PMID37395176
PMCPMC10497851
OpenAlexW4382919455

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.