Evidence map›Paper›PMID 37394496›Full record

ArticleMicrobiome2023

Rhizobial nitrogen fixation efficiency shapes endosphere bacterial communities and Medicago truncatula host growth.

Beatriz Lagunas, Luke Richards, Chrysi Sergaki, Jamie Burgess, Alonso Javier Pardal, Rana M F Hussain, Bethany L Richmond, Laura Baxter, Proyash Roy, Anastasia Pakidi and 5 more

Abstract readVideo-Audio Media
In one paragraph

Article in Microbiome, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
  2. A vitamin BScience advances · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Impact ofPlants (Basel, Switzerland) · 2026
    Article
  7. Article
  8. Article
  9. Mobile gene clusters and coexpressed plant-rhizobium pathways drive partner quality variation in symbiosis.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Genetic Characterization ofPlants (Basel, Switzerland) · 2024
    Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Beatriz Lagunas *School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK. B.Lagunas-Castan@warwick.ac.uk.ORCID 0000-0003-2372-7520
Luke Richards *School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.ORCID 0000-0002-6449-9555
Chrysi Sergaki *School of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.ORCID 0000-0003-0477-8680
Jamie BurgessSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Alonso Javier PardalWarwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.
Rana M F HussainSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Bethany L RichmondSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.ORCID 0000-0001-5279-4269
Laura BaxterSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Proyash RoySchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.ORCID 0000-0002-8053-5691
Anastasia PakidiSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.ORCID 0000-0001-7048-5734
Gina StovoldSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK.
Saúl VázquezUniversity of Nottingham, Sutton Bonington Campus, Sutton Bonington, Nottingham, LE12 5RD, UK.
Sascha OttWarwick Medical School, University of Warwick, Coventry, CV4 7AL, UK.
Patrick SchäferSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK. Patrick.Schaefer@agrar.uni-giessen.de.ORCID 0000-0002-0366-6858
Miriam L GiffordSchool of Life Sciences, University of Warwick, Coventry, CV4 7AL, UK. miriam.gifford@warwick.ac.uk.ORCID 0000-0002-4005-2513

Funding

Biotechnology and Biological Sciences Research Council BB/P002145/1Biotechnology and Biological Sciences Research Council BB/T015357/1
6 · The paper itself

Abstract

backgroundDespite the knowledge that the soil-plant-microbiome nexus is shaped by interactions amongst its members, very little is known about how individual symbioses regulate this shaping. Even less is known about how the agriculturally important symbiosis of nitrogen-fixing rhizobia with legumes is impacted according to soil type, yet this knowledge is crucial if we are to harness or improve it. We asked how the plant, soil and microbiome are modulated by symbiosis between the model legume Medicago truncatula and different strains of Sinorhizobium meliloti or Sinorhizobium medicae whose nitrogen-fixing efficiency varies, in three distinct soil types that differ in nutrient fertility, to examine the role of the soil environment upon the plant-microbe interaction during nodulation.

resultsThe outcome of symbiosis results in installment of a potentially beneficial microbiome that leads to increased nutrient uptake that is not simply proportional to soil nutrient abundance. A number of soil edaphic factors including Zn and Mo, and not just the classical N/P/K nutrients, group with microbial community changes, and alterations in the microbiome can be seen across different soil fertility types. Root endosphere emerged as the plant microhabitat more affected by this rhizobial efficiency-driven community reshaping, manifested by the accumulation of members of the phylum Actinobacteria. The plant in turn plays an active role in regulating its root community, including sanctioning low nitrogen efficiency rhizobial strains, leading to nodule senescence in particular plant-soil-rhizobia strain combinations.

conclusionsThe microbiome-soil-rhizobial dynamic strongly influences plant nutrient uptake and growth, with the endosphere and rhizosphere shaped differentially according to plant-rhizobial interactions with strains that vary in nitrogen-fixing efficiency levels. These results open up the possibility to select inoculation partners best suited for plant, soil type and microbial community. Video Abstract.

Indexed as

Medicago truncatulaRhizobiumSinorhizobium melilotiNitrogen FixationSymbiosisEndosphereMedicago truncatulaMicrobial communitiesNitrogen fixation efficiencyNodulationNodule sanctioningPlant–rhizobial interactionSoil

Identifiers

PMID37394496
PMCPMC10316601

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.