Evidence map›Paper›PMID 37393431›Full record

ArticleBiophysical journal2023

Dry mass photometry of single bacteria using quantitative wavefront microscopy.

Maëlle Bénéfice, Aurore Gorlas, Baptiste Marthy, Violette Da Cunha, Patrick Forterre, Anne Sentenac, Patrick C Chaumet, Guillaume Baffou

Open access · greenAbstract read
In one paragraph

Article in Biophysical journal, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Quantitative phase microscopies: accuracy comparison.Light, science & applications · 2024
    Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Maëlle BénéficeInstitut Fresnel, CNRS, Aix Marseille University, Centrale Marseille, Marseille, France.
Aurore GorlasUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Baptiste MarthyInstitut Fresnel, CNRS, Aix Marseille University, Centrale Marseille, Marseille, France.
Violette Da CunhaUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France.
Patrick ForterreUniversité Paris-Saclay, CEA, CNRS, Institute for Integrative Biology of the Cell (I2BC), Gif-sur-Yvette, France; Département de Microbiologie, Institut Pasteur, Paris, France.
Anne SentenacInstitut Fresnel, CNRS, Aix Marseille University, Centrale Marseille, Marseille, France.
Patrick C ChaumetInstitut Fresnel, CNRS, Aix Marseille University, Centrale Marseille, Marseille, France.
Guillaume BaffouInstitut Fresnel, CNRS, Aix Marseille University, Centrale Marseille, Marseille, France. Electronic address: guillaume.baffou@fresnel.fr.
Centre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantitative phase microscopy (QPM) represents a noninvasive alternative to fluorescence microscopy for cell observation with high contrast and for the quantitative measurement of dry mass (DM) and growth rate at the single-cell level. While DM measurements using QPM have been widely conducted on mammalian cells, bacteria have been less investigated, presumably due to the high resolution and high sensitivity required by their smaller size. This article demonstrates the use of cross-grating wavefront microscopy, a high-resolution and high-sensitivity QPM, for accurate DM measurement and monitoring of single microorganisms (bacteria and archaea). The article covers strategies for overcoming light diffraction and sample focusing, and introduces the concepts of normalized optical volume and optical polarizability (OP) to gain additional information beyond DM. The algorithms for DM, optical volume, and OP measurements are illustrated through two case studies: monitoring DM evolution in a microscale colony-forming unit as a function of temperature, and using OP as a potential species-specific signature.

Indexed as

AlgorithmsPhotometryAnimalsBacteriaMammalsMicroscopy, Fluorescence

Identifiers

PMID37393431
PMCPMC10432216
OpenAlexW4382655403

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.