Evidence map›Paper›PMID 37388252›Full record

ArticleFrontiers in digital health2023

Multilingual RECIST classification of radiology reports using supervised learning.

Luc Mottin, Jean-Philippe Goldman, Christoph Jäggli, Rita Achermann, Julien Gobeill, Julien Knafou, Julien Ehrsam, Alexandre Wicky, Camille L Gérard, Tanja Schwenk and 9 more

Abstract read
In one paragraph

Article in Frontiers in digital health, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Luc MottinHES-SO\HEG Genève, Information Sciences, Geneva, Switzerland.
Jean-Philippe GoldmanDivision of Medical Information Sciences, University Hospitals of Geneva, Geneva, Switzerland.
Christoph JäggliInselspital - Bern University Hospital and University of Bern, Bern, Switzerland.
Rita AchermannDepartment of Radiology, Clinic of Radiology & Nuclear Medicine, University Hospital Basel, University of Basel, Basel, Switzerland.
Julien GobeillHES-SO\HEG Genève, Information Sciences, Geneva, Switzerland.
Julien KnafouHES-SO\HEG Genève, Information Sciences, Geneva, Switzerland.
Julien EhrsamDepartment of Radiology and Medical Informatics, University of Geneva, Geneva, Switzerland.
Alexandre WickyPrecision Oncology Center, Oncology Department, Centre Hospitalier Universitaire Vaudois - CHUV, Lausanne, Switzerland.
Camille L GérardPrecision Oncology Center, Oncology Department, Centre Hospitalier Universitaire Vaudois - CHUV, Lausanne, Switzerland.
Tanja SchwenkDepartment of Oncology, Kantonsspital Aarau, Aarau, Switzerland.
Mélinda CharrierDivision of Medical Information Sciences, University Hospitals of Geneva, Geneva, Switzerland.
Petros TsantoulisDivision of Medical Information Sciences, University Hospitals of Geneva, Geneva, Switzerland.
Christian LovisDivision of Medical Information Sciences, University Hospitals of Geneva, Geneva, Switzerland.
Alexander LeichtleInselspital - Bern University Hospital and University of Bern, Bern, Switzerland.
Michael K KiesslingDepartment of Medical Oncology and Hematology, University Hospital Zurich, Zurich, Switzerland.
Olivier MichielinPrecision Oncology Center, Oncology Department, Centre Hospitalier Universitaire Vaudois - CHUV, Lausanne, Switzerland.
Sylvain PradervandPrecision Oncology Center, Oncology Department, Centre Hospitalier Universitaire Vaudois - CHUV, Lausanne, Switzerland.
Vasiliki FoufiDivision of Medical Information Sciences, University Hospitals of Geneva, Geneva, Switzerland.
Patrick RuchHES-SO\HEG Genève, Information Sciences, Geneva, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: The objective of this study is the exploration of Artificial Intelligence and Natural Language Processing techniques to support the automatic assignment of the four Response Evaluation Criteria in Solid Tumors (RECIST) scales based on radiology reports. We also aim at evaluating how languages and institutional specificities of Swiss teaching hospitals are likely to affect the quality of the classification in French and German languages. Methods: In our approach, 7 machine learning methods were evaluated to establish a strong baseline. Then, robust models were built, fine-tuned according to the language (French and German), and compared with the expert annotation. Results: The best strategies yield average F1-scores of 90% and 86% respectively for the 2-classes (Progressive/Non-progressive) and the 4-classes (Progressive Disease, Stable Disease, Partial Response, Complete Response) RECIST classification tasks. Conclusions: These results are competitive with the manual labeling as measured by Matthew's correlation coefficient and Cohen's Kappa (79% and 76%). On this basis, we confirm the capacity of specific models to generalize on new unseen data and we assess the impact of using Pre-trained Language Models (PLMs) on the accuracy of the classifiers.

Indexed as

language modelsnarrative text classificationradiology reportsRECISTsupervised machine learning

Identifiers

PMID37388252
PMCPMC10303934

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.