Evidence map›Paper›PMID 37386008›Full record

ArticleNature communications2023

The proteomic landscape of soft tissue sarcomas.

Jessica Burns, Christopher P Wilding, Lukas Krasny, Xixuan Zhu, Madhumeeta Chadha, Yuen Bun Tam, Hari Ps, Aswanth H Mahalingam, Alexander T J Lee, Amani Arthur and 23 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
11.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 42 citations in OpenAlex.

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  16. Clinical Implications and Molecular Features of Extracellular Matrix Networks in Soft Tissue Sarcomas.Clinical cancer research : an official journal of the American Association for Cancer Research · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors at 6 institutions in 2 countries.

Jessica BurnsDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Christopher P WildingDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Lukas KrasnyDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Xixuan ZhuDivision of Clinical Studies, The Institute of Cancer Research, London, UK.ORCID 0000-0003-3477-3426
Madhumeeta ChadhaDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Yuen Bun TamDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Hari PsDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Aswanth H MahalingamDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Alexander T J LeeDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Amani ArthurDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Nafia GuljarDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Emma PerkinsDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Valeriya PankovaDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Andrew JenksDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Vanessa DjabateyDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Cornelia SzecseiDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Frank McCarthyDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.ORCID 0000-0002-7933-6847
Chanthirika RagulanDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Martina MilighettiDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.ORCID 0000-0003-4170-8796
Theodoros I RoumeliotisDivision of Cancer Biology, The Institute of Cancer Research, London, UK.ORCID 0000-0002-3354-5643
Stephen CrosierWolfson Childhood Cancer Research Centre, Translational and Clinical Research Institute, Newcastle University Centre for Cancer, Newcastle University, Newcastle upon Tyne, UK.
Martina FinettiLeeds Institute of Medical Research at St James's, St James's University Hospital, Leeds, UK.
Jyoti S ChoudharyDivision of Cancer Biology, The Institute of Cancer Research, London, UK.ORCID 0000-0003-0881-5477
Ian JudsonThe Royal Marsden NHS Foundation Trust, London, UK.
Cyril FisherUniversity Hospitals Birmingham NHS Foundation Trust, Birmingham, UK.
Eugene F SchusterRalph Lauren Centre for Breast Cancer Research, The Royal Marsden NHS Foundation Trust, London, UK.ORCID 0000-0001-5076-2810
Anguraj SadanandamDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.ORCID 0000-0001-8485-5150
Tom W ChenDepartment of Oncology, National Taiwan University Hospital, Taipei City, Taiwan.ORCID 0000-0003-4112-4029
Daniel WilliamsonWolfson Childhood Cancer Research Centre, Translational and Clinical Research Institute, Newcastle University Centre for Cancer, Newcastle University, Newcastle upon Tyne, UK.
Khin ThwayDivision of Molecular Pathology, The Institute of Cancer Research, London, UK.
Robin L JonesDivision of Clinical Studies, The Institute of Cancer Research, London, UK.ORCID 0000-0003-4173-3844
Maggie C U CheangDivision of Clinical Studies, The Institute of Cancer Research, London, UK.
Paul H HuangDivision of Molecular Pathology, The Institute of Cancer Research, London, UK. paul.huang@icr.ac.uk.ORCID 0000-0003-3972-5087
Institute of Cancer Research · GBRoyal Marsden NHS Foundation Trust · GBNewcastle University · GBNational Taiwan University · TWSt James's University Hospital · GBUniversity Hospitals Birmingham NHS Foundation Trust · GB

Funding

Cancer Research UK 29363
6 · The paper itself

Abstract

Soft tissue sarcomas (STS) are rare and diverse mesenchymal cancers with limited treatment options. Here we undertake comprehensive proteomic profiling of tumour specimens from 321 STS patients representing 11 histological subtypes. Within leiomyosarcomas, we identify three proteomic subtypes with distinct myogenesis and immune features, anatomical site distribution and survival outcomes. Characterisation of undifferentiated pleomorphic sarcomas and dedifferentiated liposarcomas with low infiltrating CD3 + T-lymphocyte levels nominates the complement cascade as a candidate immunotherapeutic target. Comparative analysis of proteomic and transcriptomic profiles highlights the proteomic-specific features for optimal risk stratification in angiosarcomas. Finally, we define functional signatures termed Sarcoma Proteomic Modules which transcend histological subtype classification and show that a vesicle transport protein signature is an independent prognostic factor for distant metastasis. Our study highlights the utility of proteomics for identifying molecular subgroups with implications for risk stratification and therapy selection and provides a rich resource for future sarcoma research.

Indexed as

HemangiosarcomaLeiomyosarcomaSarcomaSoft Tissue NeoplasmsHumansProteomics

Identifiers

PMID37386008
PMCPMC10310735
OpenAlexW4382631339

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.