Evidence map›Paper›PMID 37385393›Full record

ArticleNeuroImage2023

High-dimensional multivariate autoregressive model estimation of human electrophysiological data using fMRI priors.

Alliot Nagle, Josh P Gerrelts, Bryan M Krause, Aaron D Boes, Joel E Bruss, Kirill V Nourski, Matthew I Banks, Barry Van Veen

Abstract read
In one paragraph

Article in NeuroImage, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alliot NagleDepartment of Electrical and Computer Engineering, University of Wisconsin, Madison, 53706, WI, USA; Department of Anesthesiology, University of Wisconsin, Madison, 53706, WI, USA.
Josh P GerreltsDepartment of Electrical and Computer Engineering, University of Wisconsin, Madison, 53706, WI, USA.
Bryan M KrauseDepartment of Anesthesiology, University of Wisconsin, Madison, 53706, WI, USA.
Aaron D BoesDepartment of Neurology, The University of Iowa, Iowa City, 52242, IA, USA.
Joel E BrussDepartment of Neurology, The University of Iowa, Iowa City, 52242, IA, USA.
Kirill V NourskiDepartment of Neurosurgery, The University of Iowa, Iowa City, 52242, IA, USA; Iowa Neuroscience Institute, The University of Iowa, Iowa City, 52242, IA, USA.
Matthew I BanksDepartment of Anesthesiology, University of Wisconsin, Madison, 53706, WI, USA. Electronic address: mibanks@wisc.edu.
Barry Van VeenDepartment of Electrical and Computer Engineering, University of Wisconsin, Madison, 53706, WI, USA.

Funding

UNIVERSITY OF IOWA CTSA FOR PEDIATRIC RESEARCHUL1RR024979 · NCRR · UNIVERSITY OF IOWA · PI ROSENTHAL, GARY E · 2007 to 2011
$31.8M
HUMAN AUDITORY CORTEX PHYSIOLOGYR01DC004290 · NIDCD · UNIVERSITY OF IOWA · PI HOWARD, MATTHEW A. · 2000 to 2025
$13.7M
Thalamic and cortical mechanisms of anesthetic-induced unconsciousnessR01GM109086 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Matthew I Banks, Kirill V Nourski · 2014 to 2026
$5.7M
NCRR NIH HHS UL1 RR024979NIDCD NIH HHS R01 DC004290NIGMS NIH HHS R01 GM109086
6 · The paper itself

Abstract

Multivariate autoregressive (MVAR) model estimation enables assessment of causal interactions in brain networks. However, accurately estimating MVAR models for high-dimensional electrophysiological recordings is challenging due to the extensive data requirements. Hence, the applicability of MVAR models for study of brain behavior over hundreds of recording sites has been very limited. Prior work has focused on different strategies for selecting a subset of important MVAR coefficients in the model to reduce the data requirements of conventional least-squares estimation algorithms. Here we propose incorporating prior information, such as resting state functional connectivity derived from functional magnetic resonance imaging, into MVAR model estimation using a weighted group least absolute shrinkage and selection operator (LASSO) regularization strategy. The proposed approach is shown to reduce data requirements by a factor of two relative to the recently proposed group LASSO method of Endemann et al (Neuroimage 254:119057, 2022) while resulting in models that are both more parsimonious and more accurate. The effectiveness of the method is demonstrated using simulation studies of physiologically realistic MVAR models derived from intracranial electroencephalography (iEEG) data. The robustness of the approach to deviations between the conditions under which the prior information and iEEG data is obtained is illustrated using models from data collected in different sleep stages. This approach allows accurate effective connectivity analyses over short time scales, facilitating investigations of causal interactions in the brain underlying perception and cognition during rapid transitions in behavioral state.

Indexed as

ElectrocorticographyMagnetic Resonance ImagingAlgorithmsBrainBrain MappingComputer SimulationElectroencephalographyHumansEffective connectivityFunctional connectivityIntracranial electrophysiologyMagnetic resonance imagingPartial directed coherence

Identifiers

PMID37385393
PMCPMC10528866

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.