Evidence map›Paper›PMID 37384864›Full record

ArticleJCO precision oncology2023

31-Gene Expression Profile Testing in Cutaneous Melanoma and Survival Outcomes in a Population-Based Analysis: A SEER Collaboration.

Christine N Bailey, Brian J Martin, Valentina I Petkov, Nicola C Schussler, Jennifer L Stevens, Suzanne Bentler, Rosemary D Cress, Jennifer A Doherty, Eric B Durbin, Scarlett L Gomez and 14 more

Abstract read
In one paragraph

Article in JCO precision oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Article
  6. Review
  7. Tumor miRNA Signatures Associate with Outcomes of Patients with Stage II/III Melanoma.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Reporting tumor genomic test results to SEER registries via linkages.Journal of the National Cancer Institute. Monographs · 2024
    Article
  19. Review
  20. Rapidly Evolving Pre- and Post-surgical Systemic Treatment of Melanoma.American journal of clinical dermatology · 2024
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors.

Christine N BaileyCastle Biosciences, Inc, Friendswood, TX.
Brian J MartinCastle Biosciences, Inc, Friendswood, TX.ORCID 0000-0001-5109-8077
Valentina I PetkovSurveillance Research Program, Division of Cancer Control & Population Sciences, National Cancer Institute, Bethesda, MD.ORCID 0009-0009-8297-5381
Nicola C SchusslerInformation Management Systems, Inc, Calverton, MD.
Jennifer L StevensInformation Management Systems, Inc, Calverton, MD.
Suzanne BentlerIowa Cancer Registry, The University of Iowa, Iowa City, IA.
Rosemary D CressPublic Health Institute, Cancer Registry of Greater California, Sacramento, CA.
Jennifer A DohertyHunstman Cancer Institute, University of Utah, Salt Lake City, UT.ORCID 0000-0002-1454-8187
Eric B DurbinCancer Research Informatics Shared Resource Facility, Markey Cancer Center, Kentucky Cancer Registry, University of Kentucky, KY.ORCID 0000-0002-5600-7645
Scarlett L GomezDepartment of Epidemiology and Biostatistics, University of California, San Francisco, San Francisco, CA.
Lou GonsalvesConnecticut Tumor Registry, Connecticut Department of Public Health, Hartford, CT.
Brenda Y HernandezUniversity of Hawaii Cancer Center, Honolulu, HI.
Lihua LiuDepartment of Population and Public Health Sciences, Keck School of Medicine, University of Southern California, Los Angeles, CA.
Bożena M MorawskiCancer Data Registry of Idaho, Boise, ID.ORCID 0000-0003-1655-6006
Maria J SchymuraBureau of Cancer Epidemiology, New York State Department of Health, Albany, NY.ORCID 0000-0003-0587-8667
Stephen M SchwartzDivision of Public Health Sciences, Fred Hutchinson Cancer Center, Seattle, WA.ORCID 0000-0001-7499-8502
Kevin C WardEmory University, Atlanta, GA.ORCID 0000-0001-5893-6192
Charles WigginsDepartment of Internal Medicine, University of New Mexico, Albuquerque, NM.ORCID 0000-0002-0661-8261
Xiao-Cheng WuLouisiana State University, School of Medicine, New Orleans, LA.ORCID 0000-0003-3663-5027
Matthew S GoldbergCastle Biosciences, Inc, Friendswood, TX.
Jennifer J SiegelCastle Biosciences, Inc, Friendswood, TX.
Robert W CookCastle Biosciences, Inc, Friendswood, TX.ORCID 0000-0003-1166-4796
Kyle R CovingtonCastle Biosciences, Inc, Friendswood, TX.
Sarah J KurleyCastle Biosciences, Inc, Friendswood, TX.

Funding

University of Kentucky Markey Cancer Center Support Grant ECIA SupplementP30CA177558 · NCI · UNIVERSITY OF KENTUCKY · PI Jennifer F Rogers · 2013 to 2026
$38.3M
NCI NIH HHS HHSN261201000041CNCI NIH HHS HHSN261201000041INCI NIH HHS HHSN261201300009CNCI NIH HHS HHSN261201300009INCI NIH HHS HHSN261201800001CNCI NIH HHS HHSN261201800002BNCI NIH HHS HHSN261201800002CNCI NIH HHS HHSN261201800003CNCI NIH HHS HHSN261201800004CNCI NIH HHS HHSN261201800005CNCI NIH HHS HHSN261201800006INCI NIH HHS HHSN261201800009CNCI NIH HHS HHSN261201800009INCI NIH HHS HHSN261201800012CNCI NIH HHS HHSN261201800012INCI NIH HHS HHSN261201800013CNCI NIH HHS HHSN261201800013INCI NIH HHS HHSN261201800014CNCI NIH HHS HHSN261201800014INCI NIH HHS HHSN261201800016CNCI NIH HHS HHSN261201800016INCI NIH HHS HHSN261201800032CNCI NIH HHS HHSN261201800032INCI NIH HHS HHSN261201800041CNCI NIH HHS P30 CA177558
6 · The paper itself

Abstract

purposeThe DecisionDx-Melanoma 31-gene expression profile (31-GEP) test is validated to classify cutaneous malignant melanoma (CM) patient risk of recurrence, metastasis, or death as low (class 1A), intermediate (class 1B/2A), or high (class 2B). This study aimed to examine the effect of 31-GEP testing on survival outcomes and confirm the prognostic ability of the 31-GEP at the population level.

methodsPatients with stage I-III CM with a clinical 31-GEP result between 2016 and 2018 were linked to data from 17 SEER registries (n = 4,687) following registries' operation procedures for linkages. Melanoma-specific survival (MSS) and overall survival (OS) differences by 31-GEP risk category were examined using Kaplan-Meier analysis and the log-rank test. Crude and adjusted hazard ratios (HRs) were calculated using Cox regression model to evaluate variables associated with survival. 31-GEP tested patients were propensity score-matched to a cohort of non-31-GEP tested patients from the SEER database. Robustness of the effect of 31-GEP testing was assessed using resampling.

resultsPatients with a 31-GEP class 1A result had higher 3-year MSS and OS than patients with a class 1B/2A or class 2B result (MSS: 99.7%

conclusionIn a population-based, clinically tested melanoma cohort, the 31-GEP stratified patients by their risk of dying from melanoma.

Indexed as

MelanomaSkin NeoplasmsCutaneous Malignant MelanomaHumansKaplan-Meier EstimateTranscriptome

Identifiers

PMID37384864
PMCPMC10530886

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.