Evidence map›Paper›PMID 37382627›Full record

ArticleThe Journal of cell biology2023

Single-cell chromatin accessibility profiling reveals a self-renewing muscle satellite cell state.

Arinze E Okafor, Xin Lin, Chenghao Situ, Xiaolin Wei, Yu Xiang, Xiuqing Wei, Zhenguo Wu, Yarui Diao

Abstract read
In one paragraph

Article in The Journal of cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
  3. Targeting C1q signaling in fibro-adipogenic progenitors prevents regenerative fibrosis of aged muscle.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Review
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  8. Article
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  11. Article
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  14. Mapping Cell Atlases at the Single-Cell Level.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Arinze E Okafor *Department of Cell Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0002-3416-1350
Xin Lin *Department of Cell Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0003-1376-3456
Chenghao Situ *Division of Life Science, Hong Kong University of Science and Technology , Kowloon, Hong Kong.ORCID 0000-0002-0637-0323
Xiaolin WeiDepartment of Cell Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0001-6313-7790
Yu XiangDepartment of Cell Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0001-8333-0782
Xiuqing WeiSanford-Burnham Prebys Medical Discovery Institute , La Jolla, CA, USA.ORCID 0000-0002-2034-6928
Zhenguo WuDivision of Life Science, Hong Kong University of Science and Technology , Kowloon, Hong Kong.ORCID 0000-0003-3049-8324
Yarui DiaoDepartment of Cell Biology, Duke University Medical Center, Durham, NC, USA.ORCID 0000-0001-5842-4082

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A balance between self-renewal and differentiation is critical for the regenerative capacity of tissue-resident stem cells. In skeletal muscle, successful regeneration requires the orchestrated activation, proliferation, and differentiation of muscle satellite cells (MuSCs) that are normally quiescent. A subset of MuSCs undergoes self-renewal to replenish the stem cell pool, but the features that identify and define self-renewing MuSCs remain to be elucidated. Here, through single-cell chromatin accessibility analysis, we reveal the self-renewal versus differentiation trajectories of MuSCs over the course of regeneration in vivo. We identify Betaglycan as a unique marker of self-renewing MuSCs that can be purified and efficiently contributes to regeneration after transplantation. We also show that SMAD4 and downstream genes are genetically required for self-renewal in vivo by restricting differentiation. Our study unveils the identity and mechanisms of self-renewing MuSCs, while providing a key resource for comprehensive analysis of muscle regeneration.

Indexed as

ChromatinMuscle, SkeletalRegenerationSatellite Cells, Skeletal MuscleCell DifferentiationCell DivisionChromatin

Identifiers

PMID37382627
PMCPMC10309185

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.