Evidence map›Paper›PMID 37380971›Full record

ArticleBMC cancer2023

Upregulation of dihydropyrimidinase-like 3 (DPYSL3) protein predicts poor prognosis in urothelial carcinoma.

Peir-In Liang, Hong-Yue Lai, Ti-Chun Chan, Wei-Ming Li, Chung-Hsi Hsing, Steven K Huang, Kun-Lin Hsieh, Wen-Hsin Tseng, Tzu-Ju Chen, Wan-Shan Li and 3 more

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Article in BMC cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 7 institutions in 1 country.

Peir-In LiangDepartment of Pathology, Kaohsiung Medical University Hospital, Kaohsiung Medical University, Kaohsiung, 807378, Taiwan.
Hong-Yue LaiDepartment of Medical Research, Chi Mei Medical Center, Tainan, 710402, Taiwan.
Ti-Chun ChanDepartment of Medical Research, Chi Mei Medical Center, Tainan, 710402, Taiwan.
Wei-Ming LiDepartment of Urology, Kaohsiung Medical University Hospital, Kaohsiung Medical University, Kaohsiung, 807378, Taiwan.
Chung-Hsi HsingDepartment of Medical Research, Chi Mei Medical Center, Tainan, 710402, Taiwan.
Steven K HuangDepartment of Surgery, Division of Urology, Chi Mei Medical Center, Tainan, 710402, Taiwan.
Kun-Lin HsiehDepartment of Surgery, Division of Urology, Chi Mei Medical Center, Tainan, 710402, Taiwan.
Wen-Hsin TsengDepartment of Surgery, Division of Urology, Chi Mei Medical Center, Tainan, 710402, Taiwan.
Tzu-Ju ChenDepartment of Clinical Pathology, Chi Mei Medical Center, Tainan, 710402, Taiwan.
Wan-Shan LiDepartment of Medical Technology, Chung Hwa University of Medical Technology, Tainan, 71703, Taiwan.
Huan-Da ChenDepartment of Pathology, Kaohsiung Medical University Hospital, Kaohsiung Medical University, Kaohsiung, 807378, Taiwan.
Yu-Hsuan KuoDepartment of Internal Medicine, Division of Hematology and Oncology, Chi-Mei Medical Center, Tainan, 710402, Taiwan. a10901@mail.chimei.org.tw.
Chien-Feng LiDepartment of Medical Research, Chi Mei Medical Center, Tainan, 710402, Taiwan. angelo.p@yahoo.com.tw.
Chi Mei Medical Center · TWKaohsiung Medical University · TWChia Nan University of Pharmacy and Science · TWChung Hwa University of Medical Technology · TWMinistry of Health and Welfare · TWNational Health Research Institutes · TWPingtung Hospital · TW

Funding

Kaohsiung Medical University Hospital, Kaohsiung, Taiwan KMUH107-7M39Ministry of Science and Technology, Taiwan MOST108-2320-B-037-027
6 · The paper itself

Abstract

backgroundDihydropyrimidinase-like 3 (DPYSL3) is a cytosolic phosphoprotein expressed in the nervous system and is crucial for neurogenesis. A previous study showed that increased DPYSL3 expression promotes tumour aggressiveness in pancreatic ductal adenocarcinoma, gastric cancer, and colon cancer. However, the role of DPYSL3 in affecting the biological behaviour of urothelial carcinoma (UC) is not yet understood.

methodsA UC transcriptomic dataset from the Gene Expression Omnibus and the Urothelial Bladder Cancer (BLCA) dataset from The Cancer Genome Atlas were used for the in silico study. We collected 340 upper urinary tract urothelial carcinoma (UTUC) and 295 urinary bladder urothelial carcinoma (UBUC) samples for the immunohistochemical study. Fresh tumour tissue from 50 patients was used to examine the DPYSL3 mRNA level. In addition, urothelial cell lines with and without DPYSL3 knockdown were used for the functional study.

resultsThe in silico study revealed that DPYSL3 correlated with advanced tumour stage and metastasis development while functioning primarily in the nucleobase-containing compound metabolic process (GO:0006139). DPYSL3 mRNA expression is significantly upregulated in advanced UC. Furthermore, overexpression of the DPYSL3 protein is significantly associated with the aggressive behaviour of UTUC and UBUC. DPYSL3 expression independently predicts disease-specific survival (DSS) and metastatic-free survival (MFS) in patients with UC. In non-muscle-invasive UBUC, DPYSL3 expression predicts local recurrence-free survival. UC cell lines with DPYSL3 knockdown exhibited decreased proliferation, migration, invasion, and human umbilical vein endothelial cells (HUVECs) tube formation but increased apoptosis and G1 arrest. Gene ontology enrichment analysis revealed that the enriched processes related to DPYSL3 overexpression in UC were tissue morphogenesis, cell mesenchyme migration, smooth muscle regulation, metabolic processes, and RNA processing. In vivo study revealed DPYSL3 knockdown in UC tumours significantly suppressed the growth of tumours and decreased MYC and GLUT1 protein expression.

conclusionsDPYSL3 promotes the aggressiveness of UC cells by changing their biological behaviours and is likely associated with cytoskeletal and metabolic process modifications. Furthermore, DPYSL3 protein overexpression in UC was associated with aggressive clinicopathological characteristics and independently predicted poor clinical outcomes. Therefore, DPYSL3 can be used as a novel therapeutic target for UC.

Indexed as

Carcinoma, Transitional CellPancreatic NeoplasmsUrinary Bladder NeoplasmsAmidohydrolasesEndothelial CellsHumansMuscle ProteinsPrognosisUp-RegulationAmidohydrolasesdihydropyrimidinaseDPYSL3 protein, humanMuscle ProteinsCellular Myelocytomatosis (C-Myc)Cytoskeleton modificationDihydropyrimidinase-like 3 (DPYSL3)Glucose transporter 1 (GLUT1)Mammalian target of rapamycin (mTOR)Metabolic process reprogrammingRibosomal protein S6 (RPS6)Upper urinary tracts urothelial carcinoma (UTUC)Urinary bladder urothelial carcinoma (UBUC)

Identifiers

PMID37380971
PMCPMC10304234
OpenAlexW4382501484

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.