Evidence map›Paper›PMID 37378433›Full record

ArticleNucleic acids research2023

CDK8 and CDK19: positive regulators of signal-induced transcription and negative regulators of Mediator complex proteins.

Mengqian Chen, Jing Li, Li Zhang, Lili Wang, Chen Cheng, Hao Ji, Serena Altilia, Xiaokai Ding, Guoshuai Cai, Diego Altomare and 15 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 64 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 4 institutions in 3 countries.

Mengqian ChenDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Jing LiDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Li ZhangDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Lili WangDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Chen ChengDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Hao JiDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Serena AltiliaDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Xiaokai DingDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Guoshuai CaiDepartment of Environmental Health Sciences, Arnold School of Public Health, University of South Carolina, Columbia, SC 29208, USA.
Diego AltomareDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Michael ShtutmanDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Stephanie D ByrumDepartment of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Samuel G MackintoshDepartment of Biochemistry and Molecular Biology, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Alexey FeoktistovInstitute of Gene Biology, Russian Academy of Sciences, 119334 Moscow, Russian Federation.
Nataliya SoshnikovaInstitute of Gene Biology, Russian Academy of Sciences, 119334 Moscow, Russian Federation.ORCID 0000-0001-9260-3068
Vladislav A MogilaInstitute of Gene Biology, Russian Academy of Sciences, 119334 Moscow, Russian Federation.
Victor TatarskiyInstitute of Gene Biology, Russian Academy of Sciences, 119334 Moscow, Russian Federation.
Maksim ErokhinInstitute of Gene Biology, Russian Academy of Sciences, 119334 Moscow, Russian Federation.
Darya ChetverinaInstitute of Gene Biology, Russian Academy of Sciences, 119334 Moscow, Russian Federation.ORCID 0000-0003-0008-3814
Angga PrawiraDepartment of Infectious Diseases, University Hospital of Heidelberg, Heidelberg, Germany.
Yi NiDepartment of Infectious Diseases, University Hospital of Heidelberg, Heidelberg, Germany.
Stephan UrbanDepartment of Infectious Diseases, University Hospital of Heidelberg, Heidelberg, Germany.
Campbell McInnesDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Eugenia V BroudeDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.
Igor B RoninsonDepartment of Drug Discovery and Biomedical Sciences, College of Pharmacy, University of South Carolina, Columbia, SC 29208, USA.ORCID 0000-0002-9211-1327
University of South Carolina · USInstitute of Gene Biology · RUHeidelberg University · DEUniversity of Arkansas for Medical Sciences · US

Funding

Targeting NMDA Receptors and Brain Estradiol to Rescue Memory in Aging FemalesP20GM109091 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI RONINSON, IGOR B · 2014 to 2024
$25.2M
Supplement for Google cloud build-outR24GM137786 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI Alan Tackett · 2020 to 2026
$15.4M
Preventing adaptive drug resistance through Mediator kinase inhibitionR01CA266027 · NCI · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI Hexin Chen, Mengqian Chen · 2022 to 2026
$3.0M
CDK8/19 inhibitors for therapy of advanced prostate cancerR44CA203184 · NCI · SENEX BIOTECHNOLOGY, INC. · PI CHEN, MENGQIAN, LILLY, MICHAEL B · 2020 to 2021
$2.0M
Preventing in vivo resistance to PI3K/AKT/mTOR inhibitors through Mediator kinase inhibitionR43CA271996 · NCI · SENEX BIOTECHNOLOGY, INC. · PI BROUDE, EUGENIA V, CHEN, MENGQIAN · 2022 to 2022
$400k
NCI NIH HHS R01 CA266027NCI NIH HHS R43 CA271996NCI NIH HHS R44 CA203184NIGMS NIH HHS P20 GM109091NIGMS NIH HHS R24 GM137786NIH HHS P20GM109091
6 · The paper itself

Abstract

We have conducted a detailed transcriptomic, proteomic and phosphoproteomic analysis of CDK8 and its paralog CDK19, alternative enzymatic components of the kinase module associated with transcriptional Mediator complex and implicated in development and diseases. This analysis was performed using genetic modifications of CDK8 and CDK19, selective CDK8/19 small molecule kinase inhibitors and a potent CDK8/19 PROTAC degrader. CDK8/19 inhibition in cells exposed to serum or to agonists of NFκB or protein kinase C (PKC) reduced the induction of signal-responsive genes, indicating a pleiotropic role of Mediator kinases in signal-induced transcriptional reprogramming. CDK8/19 inhibition under basal conditions initially downregulated a small group of genes, most of which were inducible by serum or PKC stimulation. Prolonged CDK8/19 inhibition or mutagenesis upregulated a larger gene set, along with a post-transcriptional increase in the proteins comprising the core Mediator complex and its kinase module. Regulation of both RNA and protein expression required CDK8/19 kinase activities but both enzymes protected their binding partner cyclin C from proteolytic degradation in a kinase-independent manner. Analysis of isogenic cell populations expressing CDK8, CDK19 or their kinase-inactive mutants revealed that CDK8 and CDK19 have the same qualitative effects on protein phosphorylation and gene expression at the RNA and protein levels, whereas differential effects of CDK8 versus CDK19 knockouts were attributable to quantitative differences in their expression and activity rather than different functions.

Indexed as

Cyclin-Dependent KinasesMediator ComplexCyclin-Dependent Kinase 8HumansPhosphorylationProteomicsRNACDK19 protein, humanCDK8 protein, humanCyclin-Dependent Kinase 8Cyclin-Dependent KinasesMediator ComplexRNA

Identifiers

PMID37378433
PMCPMC10415139
OpenAlexW4382344701

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.