Evidence map›Paper›PMID 37377416›Full record

ArticlemBio2023

Use and detection of a vitamin B1 degradation product yields new views of the marine B1 cycle and plankton metabolite exchange.

Ryan W Paerl, Nathaniel P Curtis, Meriel J Bittner, Melanie R Cohn, Scott M Gifford, Catherine C Bannon, Elden Rowland, Erin M Bertrand

Open access · goldAbstract read
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Ryan W PaerlDepartment of Marine, Earth, and Atmospheric Sciences, North Carolina State University , Raleigh, North Carolina, USA.ORCID 0000-0003-3980-8181
Nathaniel P CurtisDepartment of Marine, Earth, and Atmospheric Sciences, North Carolina State University , Raleigh, North Carolina, USA.ORCID 0000-0003-0656-4678
Meriel J BittnerMarine Biology Section, Department of Biology, University of Copenhagen , Helsingør, Denmark.ORCID 0000-0002-3798-6315
Melanie R CohnDepartment of Earth, Marine, and Environmental Sciences, University of North Carolina at Chapel Hill , Chapel Hill, North Carolina, USA.ORCID 0000-0001-6773-9561
Scott M GiffordDepartment of Earth, Marine, and Environmental Sciences, University of North Carolina at Chapel Hill , Chapel Hill, North Carolina, USA.ORCID 0000-0002-3222-9681
Catherine C BannonDepartment of Biology, Dalhousie University , Halifax, Nova Scotia, Canada.ORCID 0000-0002-8581-1069
Elden RowlandDepartment of Biology, Dalhousie University , Halifax, Nova Scotia, Canada.ORCID 0000-0003-4756-9125
Erin M BertrandDepartment of Biology, Dalhousie University , Halifax, Nova Scotia, Canada.ORCID 0000-0002-5950-6810
Dalhousie University · CANorth Carolina State University · USUniversity of North Carolina at Chapel Hill · USUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vitamin B1 (thiamin) is a vital nutrient for most cells in nature, including marine plankton. Early and recent experiments show that B1 degradation products instead of B1 can support the growth of marine bacterioplankton and phytoplankton. However, the use and occurrence of some degradation products remains uninvestigated, namely N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine (FAMP), which has been a focus of plant oxidative stress research. We investigated the relevance of FAMP in the ocean. Experiments and global ocean meta-omic data indicate that eukaryotic phytoplankton, including picoeukaryotes and harmful algal bloom species, use FAMP while bacterioplankton appear more likely to use deformylated FAMP, 4-amino-5-aminomethyl-2-methylpyrimidine. Measurements of FAMP in seawater and biomass revealed that it occurs at picomolar concentrations in the surface ocean, heterotrophic bacterial cultures produce FAMP in the dark-indicating non-photodegradation of B1 by cells, and B1-requiring (auxotrophic) picoeukaryotic phytoplankton produce intracellular FAMP. Our results require an expansion of thinking about vitamin degradation in the sea, but also the marine B1 cycle where it is now crucial to consider a new B1-related compound pool (FAMP), as well as generation (dark degradation-likely via oxidation), turnover (plankton uptake), and exchange of the compound within the networks of plankton. IMPORTANCE Results of this collaborative study newly show that a vitamin B1 degradation product, N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine (FAMP), can be used by diverse marine microbes (bacteria and phytoplankton) to meet their vitamin B1 demands instead of B1 and that FAMP occurs in the surface ocean. FAMP has not yet been accounted for in the ocean and its use likely enables cells to avoid B1 growth deficiency. Additionally, we show FAMP is formed in and out of cells without solar irradiance-a commonly considered route of vitamin degradation in the sea and nature. Altogether, the results expand thinking about oceanic vitamin degradation, but also the marine B1 cycle where it is now crucial to consider a new B1-related compound pool (FAMP), as well as its generation (dark degradation-likely via oxidation), turnover (plankton uptake), and exchange within networks of plankton.

Indexed as

PlanktonThiamineAquatic OrganismsOceans and SeasPhytoplanktonSeawaterVitaminsThiamineVitaminsbacterioplanktonLC/MSmarine microbiologyphytoplanktonthiaminvitaminvitamin B1

Identifiers

PMID37377416
PMCPMC10470507
OpenAlexW4382344948

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.