Evidence map›Paper›PMID 37376692›Full record

ArticleViruses2023

Genetic Variability in the E6/E7 Region of Human Papillomavirus 16 in Women from Ecuador.

Alicia Zhingre, César Bedoya-Pilozo, Diana Gutiérrez-Pallo, Inés Badano, Andrés Herrera-Yela, Zoila Salazar, Damaris Alarcón, Natali Argüello-Bravo, Maylen Espinoza, Patricio Ponce and 2 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 6 institutions in 4 countries.

Alicia ZhingreLaboratorio de Biotecnología, Universidad Católica de Cuenca, Cuenca 010107, Ecuador.
César Bedoya-PilozoHospital Luis Vernaza, Guayaquil 090306, Ecuador.
Diana Gutiérrez-PalloInstituto Nacional de Investigación en Salud Pública "Leopoldo Izquieta Pérez", Centro de Referencia Nacional de Genómica, Secuenciación y Bioinformática, Quito 170403, Ecuador.
Inés BadanoLaboratorio de Antropología Biológica y Bioinformática Aplicada, Red de Laboratorios, Universidad Nacional de Misiones and Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Posadas N3300, Argentina.
Andrés Herrera-YelaFacultad de Ingeniería, Maestría en Biología Computacional, Pontificia Universidad Católica del Ecuador, Quito 170803, Ecuador.ORCID 0000-0002-6351-3650
Zoila SalazarLaboratorio de Biotecnología, Universidad Católica de Cuenca, Cuenca 010107, Ecuador.ORCID 0000-0002-7663-8049
Damaris AlarcónInstituto Nacional de Investigación en Salud Pública "Leopoldo Izquieta Pérez", Centro de Referencia Nacional de Genómica, Secuenciación y Bioinformática, Quito 170403, Ecuador.ORCID 0000-0002-3048-884X
Natali Argüello-BravoInstituto Nacional de Investigación en Salud Pública "Leopoldo Izquieta Pérez", Laboratorio de Influenza y Otros Virus Respiratorios, Quito 170403, Ecuador.
Maylen EspinozaHospital IESS CEIBOS, Guayaquil 090615, Ecuador.
Patricio PonceInstituto Nacional de Investigación en Salud Pública "Leopoldo Izquieta Pérez", Gestión de Investigación, Desarrollo e Innovación, Quito 170403, Ecuador.
Yudira SotoInstituto de Medicina Tropical "Pedro Kouri", Laboratorio de Infecciones de Transmisión Sexual, Departamento de Virología, Autopista Novia del Mediodía Km 6 ½, La Habana 10100, Cuba.
Andrés Carrazco-MontalvoInstituto Nacional de Investigación en Salud Pública "Leopoldo Izquieta Pérez", Centro de Referencia Nacional de Genómica, Secuenciación y Bioinformática, Quito 170403, Ecuador.ORCID 0000-0002-3581-7761
Instituto Nacional de Investigación en Salud Pública · ECUniversidad Católica de Cuenca · ECConsejo Nacional de Investigaciones Científicas y Técnicas · ARHospital Luis Vernaza · ECInstituto de Medicina Tropical “Pedro Kourí” · CUPontificia Universidad Católica del Ecuador · EC

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human Papillomavirus (HPV) infection is associated with intraepithelial neoplasia and cervical cancer (CC). Ecuador has a high prevalence of cervical cancer, with more than 1600 new cases diagnosed annually. This study aimed to analyze oncogenes E6 and E7 of HPV16 in samples collected from women with cancerous and precancerous cervical lesions from the Ecuadorian coast. Twenty-nine women, including six with ASCUS, three with LSIL, thirteen with HSIL, and seven with Cacu, were analyzed. The most common SNPs were E6 350G or L83V (82.6%) and E6 145T/286A/289G/335T/350G or Q14H/F78Y/L83V (17.4%). Both variants are reported to be associated with an increased risk of cervical cancer in worldwide studies. In contrast, all E7 genes have conserved amino-acid positions. Phylogenetic trees showed the circulation of the D (26.1%) and A (73.9) lineages. The frequency of D was higher than that reported in other comparable studies in Ecuador and Latin America, and may be related to the ethnic composition of the studied populations. This study contributes to the characterization of the potential risk factors for cervical carcinogenesis associated with Ecuadorian women infected with HPV16.

Indexed as

Oncogene Proteins, ViralPapillomavirus InfectionsUterine Cervical NeoplasmsEcuadorFemaleHuman papillomavirus 16Human Papillomavirus VirusesHumansPapillomavirus E7 ProteinsPhylogenyOncogene Proteins, ViralPapillomavirus E7 Proteinscervical cancergeneticshuman papilloma viruslineage

Identifiers

PMID37376692
PMCPMC10301947
OpenAlexW4381429394

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.