Evidence map›Paper›PMID 37376561›Full record

ArticleViruses2023

Novel Amplicon-Based Sequencing Approach to West Nile Virus.

Moussa Moïse Diagne, Marie Henriette Dior Ndione, Giulia Mencattelli, Amadou Diallo, El Hadji Ndiaye, Marco Di Domenico, Diawo Diallo, Mouhamed Kane, Valentina Curini, Ndeye Marieme Top and 19 more

Open access · goldAbstract read
In one paragraph

Article in Viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. First Detection of West Nile Virus Lineage 2 inPathogens (Basel, Switzerland) · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 4 institutions in 2 countries.

Moussa Moïse DiagneVirology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0001-5461-5623
Marie Henriette Dior NdioneVirology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0002-5613-4521
Giulia MencattelliIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0002-4770-756X
Amadou DialloEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0002-8584-9972
El Hadji NdiayeMedical Zoology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0002-5007-0723
Marco Di DomenicoIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0003-4795-8323
Diawo DialloMedical Zoology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0002-7478-5248
Mouhamed KaneVirology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.
Valentina CuriniIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0002-2335-3154
Ndeye Marieme TopEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.
Maurilia MarcacciIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0002-7875-633X
Maïmouna MbanneVirology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.
Massimo AncoraIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0002-7121-6373
Barbara SecondiniIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.
Valeria Di LolloIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.
Liana TeodoriIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.
Alessandra LeoneIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.
Ilaria PugliaIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0002-2334-1153
Alioune GayeMedical Zoology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0002-3683-8521
Amadou Alpha SallVirology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.
Cheikh LoucoubarEpidemiology, Clinical Research and Data Science Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0002-9582-4197
Roberto RosàCentre Agriculture Food Environment, University of Trento, 38010 San Michele all'Adige, Italy.ORCID 0000-0002-8655-2230
Mawlouth DialloMedical Zoology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.
Federica MonacoIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0002-7827-2642
Ousmane FayeVirology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.
Cesare CammàIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0002-7547-1195
Annapaola RizzoliResearch and Innovation Centre, Fondazione Edmund Mach, 38010 San Michele all'Adige, Italy.ORCID 0000-0003-3997-6783
Giovanni SaviniIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise, 64100 Teramo, Italy.ORCID 0000-0001-7933-7367
Oumar FayeVirology Department, Institut Pasteur de Dakar, Dakar BP220, Senegal.ORCID 0000-0002-3478-1322
Institut Pasteur de Dakar · SNIstituto Zooprofilattico Sperimentale dell'Abruzzo e del Molise G. Caporale · ITFondazione Edmund Mach · ITUniversity of Trento · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

West Nile virus is a re-emerging arbovirus whose impact on public health is increasingly important as more and more epidemics and epizootics occur, particularly in America and Europe, with evidence of active circulation in Africa. Because birds constitute the main reservoirs, migratory movements allow the diffusion of various lineages in the world. It is therefore crucial to properly control the dispersion of these lineages, especially because some have a greater health impact on public health than others. This work describes the development and validation of a novel whole-genome amplicon-based sequencing approach to West Nile virus. This study was carried out on different strains from lineage 1 and 2 from Senegal and Italy. The presented protocol/approach showed good coverage using samples derived from several vertebrate hosts and may be valuable for West Nile genomic surveillance.

Indexed as

West Nile FeverWest Nile virusAnimalsEuropeHumansItalySenegalamplicon-based sequencinglineagesnext-generation sequencingWest Nile virus

Identifiers

PMID37376561
PMCPMC10305458
OpenAlexW4381537818

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.