Evidence map›Paper›PMID 37375978›Full record

ArticlePlants (Basel, Switzerland)2023

Aerobiological Monitoring and Metabarcoding of Grass Pollen.

Anastasia A Krinitsina, Denis O Omelchenko, Artem S Kasianov, Vera S Karaseva, Yulia M Selezneva, Olga V Chesnokova, Vitaly A Shirobokov, Svetlana V Polevova, Elena E Severova

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Anastasia A KrinitsinaDepartment of Higher Plants, Faculty of Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.ORCID 0000-0002-0653-3655
Denis O OmelchenkoLaboratory of Plant Genomics, Institute for Information Transmission Problems, 127051 Moscow, Russia.ORCID 0000-0002-0376-6656
Artem S KasianovLaboratory of Plant Genomics, Institute for Information Transmission Problems, 127051 Moscow, Russia.
Vera S KarasevaDepartment of Biology, Institute of Natural Science, S.A. Esenin Ryazan State University, 390000 Ryazan, Russia.ORCID 0000-0002-9054-070X
Yulia M SeleznevaDepartment of Biology, Institute of Natural Science, S.A. Esenin Ryazan State University, 390000 Ryazan, Russia.
Olga V ChesnokovaDepartment of Higher Plants, Faculty of Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.
Vitaly A ShirobokovDepartment of Higher Plants, Faculty of Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.
Svetlana V PolevovaDepartment of Higher Plants, Faculty of Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.
Elena E SeverovaDepartment of Higher Plants, Faculty of Biology, Lomonosov Moscow State University, 119991 Moscow, Russia.ORCID 0000-0002-0547-5625

Funding

Institute for Information Transmission Problems FFNU-2022-0037Russian Foundation for Basic Research 19-05-50035
6 · The paper itself

Abstract

Grass pollen is one of the leading causes of pollinosis, affecting 10-30% of the world's population. The allergenicity of pollen from different Poaceae species is not the same and is estimated from moderate to high. Aerobiological monitoring is a standard method that allows one to track and predict the dynamics of allergen concentration in the air. Poaceae is a stenopalynous family, and thus grass pollen can usually be identified only at the family level with optical microscopy. Molecular methods, in particular the DNA barcoding technique, can be used to conduct a more accurate analysis of aerobiological samples containing the DNA of various plant species. This study aimed to test the possibility of using the ITS1 and ITS2 nuclear loci for determining the presence of grass pollen from air samples via metabarcoding and to compare the analysis results with the results of phenological observations. Based on the high-throughput sequencing data, we analyzed the changes in the composition of aerobiological samples taken in the Moscow and Ryazan regions for three years during the period of active flowering of grasses. Ten genera of the Poaceae family were detected in airborne pollen samples. The representation for most of them for ITS1 and ITS2 barcodes was similar. At the same time, in some samples, the presence of specific genera was characterized by only one sequence: either ITS1 or ITS2. Based on the analysis of the abundance of both barcode reads in the samples, the following order could describe the change with time in the dominant species in the air:

Indexed as

airborne pollenITS1ITS2metabarcodingphenologyPoaceaeRussia

Identifiers

PMID37375978
PMCPMC10302275

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.