Evidence map›Paper›PMID 37375447›Full record

ArticlePathogens (Basel, Switzerland)2023

Molecular Characterization of Porcine Reproductive and Respiratory Syndrome Virus in Korea from 2018 to 2022.

Min-A Lee, Usharani Jayaramaiah, Su-Hwa You, Eun-Gyeong Shin, Seung-Min Song, Lanjeong Ju, Seok-Jin Kang, Bang-Hun Hyun, Hyang-Sim Lee

Abstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Min-A LeeViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Usharani JayaramaiahViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Su-Hwa YouViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Eun-Gyeong ShinViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Seung-Min SongViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Lanjeong JuViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Seok-Jin KangViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Bang-Hun HyunViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.
Hyang-Sim LeeViral Disease Division, Animal and Plant Quarantine Agency, 177 Hyeoksin-ro, Gimcheon-si 39660, Republic of Korea.

Funding

Animal and Plant Quarantine Agency M-1543083-2020-23-01
6 · The paper itself

Abstract

Porcine reproductive and respiratory syndrome (PRRS) is an endemic disease in the Republic of Korea. Surveillance of PRRS virus (PRRSV) types is critical to tailor control measures. This study collected 5062 serum and tissue samples between 2018 and 2022. Open reading frame 5 (ORF5) sequences suggest that subgroup A (42%) was predominant, followed by lineage 1 (21%), lineage 5 (14%), lineage Korea C (LKC) (9%), lineage Korea B (LKB) (6%), and subtype 1C (5%). Highly virulent lineages 1 (NADC30/34/MN184) and 8 were also detected. These viruses typically mutate or recombine with other viruses. ORF5 and non-structural protein 2 (NSP2) deletion patterns were less variable in the PRRSV-1. Several strains belonging to PRRSV-2 showed differences in NSP2 deletion and ORF5 sequences. Similar vaccine-like isolates to the PRRSV-1 subtype 1C and PRRSV-2 lineage 5 were also found. The virus is evolving independently in the field and has eluded vaccine protection. The current vaccine that is used in Korea offers only modest or limited heterologous protection. Ongoing surveillance to identify the current virus strain in circulation is necessary to design a vaccine. A systemic immunization program with region-specific vaccinations and stringent biosecurity measures is required to reduce PRRSV infections in the Republic of Korea.

Indexed as

lineagemolecular characterizationNSP2ORF5PRRSVsubtype

Identifiers

PMID37375447
PMCPMC10303207

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.