Evidence map›Paper›PMID 37375241›Full record

ArticleMolecules (Basel, Switzerland)2023

Modulation of Functional Phosphorylation Sites by Basic Residues in the Unique Domain of c-Src.

Andras Lang, Alejandro Fernández, Mireia Diaz-Lobo, Mar Vilanova, Francisco Cárdenas, Margarida Gairí, Miquel Pons

Open access · goldAbstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Andras LangBioNMR Laboratory, Departament de Química Inorgànica i Orgànica, Universitat de Barcelona (UB), Baldiri Reixac 10-12, 08028 Barcelona, Spain.ORCID 0000-0002-3329-2359
Alejandro FernándezBioNMR Laboratory, Departament de Química Inorgànica i Orgànica, Universitat de Barcelona (UB), Baldiri Reixac 10-12, 08028 Barcelona, Spain.ORCID 0000-0002-4163-2202
Mireia Diaz-LoboInstitute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Baldiri Reixac 10, 08028 Barcelona, Spain.ORCID 0000-0001-8325-5188
Mar VilanovaInstitute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology (BIST), Baldiri Reixac 10, 08028 Barcelona, Spain.ORCID 0000-0003-4481-739X
Francisco CárdenasCentres Científics i Tecnològics de la Universitat de Barcelona (CCiTUB), Universitat de Barcelona (UB), Baldiri Reixac 10-12, 08028 Barcelona, Spain.ORCID 0000-0001-6607-2865
Margarida GairíCentres Científics i Tecnològics de la Universitat de Barcelona (CCiTUB), Universitat de Barcelona (UB), Baldiri Reixac 10-12, 08028 Barcelona, Spain.ORCID 0000-0003-3560-5897
Miquel PonsBioNMR Laboratory, Departament de Química Inorgànica i Orgànica, Universitat de Barcelona (UB), Baldiri Reixac 10-12, 08028 Barcelona, Spain.ORCID 0000-0002-0586-8322
Universitat de Barcelona · ESInstitute for Research in Biomedicine · ES

Funding

EU Next Generation ICTS2021-6875EU Next Generation ICTS2022-7829Instituto de Salud Carlos III IPT17/0019-ISCIII-SGEFI/ERDFMICIN/FEDER FEDER EQC2019-5587PMICIN (spain) PID2019-104914RB-I00MICIN (Spain) PDC2021-121629-I00
6 · The paper itself

Abstract

In contrast to the well-studied canonical regulatory mechanisms, the way by which the recently discovered Src N-terminal regulatory element (SNRE) modulates Src activity is not yet well understood. Phosphorylation of serine and threonine residues modulates the charge distribution along the disordered region of the SNRE and may affect a fuzzy complex with the SH3 domain that is believed to act as an information transduction element. The pre-existing positively charged sites can interact with the newly introduced phosphate groups by modulating their acidity, introducing local conformational restrictions, or by coupling various phosphosites into a functional unit. In this paper, we use pH-dependent NMR measurements combined with single point mutations to identify the interactions of basic residues with physiologically important phosphorylated residues and to characterize the effect of these interactions in neighbor residues, thus providing insight into the electrostatic network in the isolated disordered regions and in the entire SNRE. From a methodological point of view, the linear relationships observed between the mutation-induced pKa changes of the phosphate groups of phosphoserine and phosphothreonine and the pH-induced chemical shifts of the NH groups of these residues provide a very convenient alternative to identify interacting phosphate groups without the need to introduce point mutations on specific basic residues.

Indexed as

Proto-Oncogene Proteins pp60(c-src)src Homology DomainsPhosphorylationPhosphoserineSerinePhosphoserineProto-Oncogene Proteins pp60(c-src)SerineERK2fuzzy complexguanidinium–phosphate salt bridgeIDP phosphorylationintrinsically disordered proteinsphosphoserinephosphothreoninepKa measurementsSNRE

Identifiers

PMID37375241
PMCPMC10304449
OpenAlexW4380372979

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.