Evidence map›Paper›PMID 37374948›Full record

ArticleMicroorganisms2023

Genome Analysis of Methicillin-Resistant and Methicillin-Susceptible

Abdeljallil Zeggay, Alban Atchon, Benoit Valot, Didier Hocquet, Xavier Bertrand, Kevin Bouiller

Open access · goldAbstract read
In one paragraph

Article in Microorganisms, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. The Role of Prophage ϕSa3 in the Adaption ofAntibiotics (Basel, Switzerland) · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Abdeljallil ZeggayCHU Besançon, Maladies Infectieuses et Tropicales, 25000 Besançon, France.ORCID 0000-0002-4589-404X
Alban AtchonUMR-CNRS 6249 Chrono-Environnement, Université de Franche-Comté, 25000 Besançon, France.
Benoit ValotUMR-CNRS 6249 Chrono-Environnement, Université de Franche-Comté, 25000 Besançon, France.
Didier HocquetUMR-CNRS 6249 Chrono-Environnement, Université de Franche-Comté, 25000 Besançon, France.
Xavier BertrandUMR-CNRS 6249 Chrono-Environnement, Université de Franche-Comté, 25000 Besançon, France.ORCID 0000-0002-8028-1396
Kevin BouillerCHU Besançon, Maladies Infectieuses et Tropicales, 25000 Besançon, France.ORCID 0000-0002-2177-4318
Centre National de la Recherche Scientifique · FRCentre Hospitalier Universitaire de Besançon · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundUsing genomic data, we determined the origin of MRSA ST398 isolates responsible for invasive infection in patients with no known livestock contact.

methodsWe sequenced the genome of seven MSSA and four MRSA ST398 isolates from patients with invasive infections between 2013 and 2017, using the Illumina technique. Prophage-associated virulence genes and resistance genes were identified. To determine the origin of the isolates, their genome sequences were included in phylogenetic analysis also encompassing the ST398 genomes available on NCBI.

resultsAll isolates carried the φSa3 prophage, but with variations in the immune evasion cluster: type C in MRSA isolates, and type B in MSSA isolates. All MSSA belonged to the

conclusionWe showed that the clinical isolates MRSA and MSSA ST398 have different origins. An acquisition of virulence genes by livestock-associated MRSA isolates allows them to induce an invasive infection in human.

Indexed as

animalsCC398human ST398livestock-associatedmethicillin-susceptible Staphylococcus aureus

Identifiers

PMID37374948
PMCPMC10302279
OpenAlexW4378907448

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.