Evidence map›Paper›PMID 37372004›Full record

ArticleAntioxidants (Basel, Switzerland)2023

Each Cellular Compartment Has a Characteristic Protein Reactive Cysteine Ratio Determining Its Sensitivity to Oxidation.

Ricardo Pires das Neves, Mónica Chagoyen, Antonio Martinez-Lorente, Carlos Iñiguez, Ana Calatrava, Juana Calabuig, Francisco J Iborra

Open access · goldAbstract read
In one paragraph

Article in Antioxidants (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Ricardo Pires das NevesCenter for Neuroscience and Cell Biology, CIBB-Centre for Innovative Biomedicine and Biotechnology, University of Coimbra, 3004-517 Coimbra, Portugal.ORCID 0000-0003-2291-6610
Mónica ChagoyenCentro Nacional de Biotecnología, CSIC, Darwin 3, 28049 Madrid, Spain.
Antonio Martinez-LorenteUnidad de Investigación, Innovación y Docencia Médica, Hospital Universitario Vinalopó, 03293 Elx, Spain.
Carlos IñiguezDepartment of Biotecnology, University of Alicante, 03690 Alicante, Spain.
Ana CalatravaDepartment of Pathology, Fundación Instituto Valenciano de Oncología, 46009 Valencia, Spain.
Juana CalabuigIC Biomed, 03638 Salinas, Spain.
Francisco J IborraInstituto de Biomedicina de Valencia, CSIC, Jaime Roig 11, 46010 Valencia, Spain.ORCID 0000-0002-0692-3696
University of Alicante · ESCentro Nacional de Biotecnología · ESFundación Instituto Valenciano de Oncología · ESInstituto de Biomedicina de Valencia · ESUniversity of Coimbra · PT

Funding

Spanish Ministry of Science and Innovation PID2019-111133RB-I00
6 · The paper itself

Abstract

Signaling and detoxification of Reactive Oxygen Species (ROS) are important patho-physiologcal processes. Despite this, we lack comprehensive information on individual cells and cellular structures and functions affected by ROS, which is essential to build quantitative models of the effects of ROS. The thiol groups from cysteines (Cys) in proteins play a major role in redox defense, signaling, and protein function. In this study, we show that the proteins in each subcellular compartment contain a characteristic Cys amount. Using a fluorescent assay for -SH in thiolate form and amino groups in proteins, we show that the thiolate content correlates with ROS sensitivity and signaling properties of each compartment. The highest absolute thiolate concentration was found in the nucleolus, followed by the nucleoplasm and cytoplasm whereas protein thiolate groups per protein showed an inverse pattern. In the nucleoplasm, protein reactive thiols concentrated in SC35 speckles, SMN, and the IBODY that accumulated oxidized RNA. Our findings have important functional consequences, and explain differential sensitivity to ROS.

Indexed as

8-hydroxy guanosinenuclear specklesoxidative stressoxidized RNARNA polymeraseSMNthioredoxintranscription

Identifiers

PMID37372004
PMCPMC10295259
OpenAlexW4380997691

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.