Evidence map›Paper›PMID 37371507›Full record

ArticleBiomolecules2023

RNA-Seq Analysis of Aboveground and Underground Parts of Biomass Sorghum Was Performed to Evaluate Its Suitability for Environmental Remediation.

Tao Zhou, Dingxun Ling, Qihao He, Ping Wang, Jian Zhu

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Biomolecules, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tao ZhouCollege of Life Science and Technology, Central South University of Forestry and Technology, No.498, South Shaoshan Road, Changsha 410004, China.
Dingxun LingCollege of Environmental Science and Engineering, Central South University of Forestry and Technology, No.498, South Shaoshan Road, Changsha 410004, China.
Qihao HeCollege of Environmental Science and Engineering, Central South University of Forestry and Technology, No.498, South Shaoshan Road, Changsha 410004, China.
Ping WangCollege of Environmental Science and Engineering, Central South University of Forestry and Technology, No.498, South Shaoshan Road, Changsha 410004, China.
Jian ZhuCollege of Environmental Science and Engineering, Central South University of Forestry and Technology, No.498, South Shaoshan Road, Changsha 410004, China.
Central South University · CNCentral South University of Forestry and Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

"Alto2" is a new biomass sorghum variety, which has the characteristics of fast growth, high growth, and strong cadmium (Cd) resistance, so it has the application prospect of soil remediation plants. In order to reveal the Cd resistance mechanism of this plant and pave the way for genetic breeding and cultivation of efficient remediation plants in the future, in this research, through the determination of Cd content in various tissues of sorghum under Cd stress and the physicochemical response combined with RNA-Seq analysis, the mechanism of Cd resistance of "Alto2" was initially revealed. The results show biomass sorghum "Alto2" was mainly connected with aboveground and underground parts through the MAPK signaling pathway and plant hormone signaling pathway, and transmit stress signal in response to Cd stress. Chelase and metal-binding proteins may be the functional genes mainly responsible for Cd enrichment and transport and regulated by stress signals. However, the expression of aboveground transporters was not significant. This may be because Cd in biomass sorghum is mainly concentrated in the underground part and is enriched by the chelation of secondary metabolites from plant roots by the cell wall leading to inhibition of aboveground transporter expression. The results of this study indicate that the biomass sorghum "Alto2" on Cd has high resistance, but the lack of the aboveground enrichment of transportability requires further research to improve the Cd transportability of this plant.

Indexed as

Environmental Restoration and RemediationSoil PollutantsSorghumBiodegradation, EnvironmentalBiomassCadmiumPlant BreedingSequence Analysis, RNACadmiumSoil Pollutantsbiomass sorghumCd resistanceCd stressRNA-Seq

Identifiers

PMID37371507
PMCPMC10295823
OpenAlexW4379053977

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.