Evidence map›Paper›PMID 37371001›Full record

ArticleDiagnostics (Basel, Switzerland)2023

A Novel Hybrid Approach for Classifying Osteosarcoma Using Deep Feature Extraction and Multilayer Perceptron.

Md Tarek Aziz, S M Hasan Mahmud, Md Fazla Elahe, Hosney Jahan, Md Habibur Rahman, Dip Nandi, Lassaad K Smirani, Kawsar Ahmed, Francis M Bui, Mohammad Ali Moni

Open access · goldAbstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.6field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Md Tarek AzizCentre for Advanced Machine Learning and Applications (CAMLAs), Bashundhara R/A, Dhaka 1229, Bangladesh.ORCID 0000-0002-1875-7592
S M Hasan MahmudCentre for Advanced Machine Learning and Applications (CAMLAs), Bashundhara R/A, Dhaka 1229, Bangladesh.
Md Fazla ElaheCentre for Advanced Machine Learning and Applications (CAMLAs), Bashundhara R/A, Dhaka 1229, Bangladesh.ORCID 0000-0002-0839-5946
Hosney JahanCentre for Advanced Machine Learning and Applications (CAMLAs), Bashundhara R/A, Dhaka 1229, Bangladesh.
Md Habibur RahmanCentre for Advanced Machine Learning and Applications (CAMLAs), Bashundhara R/A, Dhaka 1229, Bangladesh.ORCID 0000-0002-5068-2690
Dip NandiDepartment of Computer Science, American International University-Bangladesh (AIUB), 408/1, Kuratoli, Khilkhet, Dhaka 1229, Bangladesh.ORCID 0000-0002-9019-9740
Lassaad K SmiraniThe Deanship of Information Technology and E-learning, Umm Al-Qura University, Mecca 24382, Saudi Arabia.ORCID 0000-0003-3195-6278
Kawsar AhmedDepartment of Electrical and Computer Engineering, University of Saskatchewan, 57 Campus Drive, Saskatoon, SK S7N 5A9, Canada.ORCID 0000-0002-4034-9819
Francis M BuiDepartment of Electrical and Computer Engineering, University of Saskatchewan, 57 Campus Drive, Saskatoon, SK S7N 5A9, Canada.ORCID 0000-0002-8799-5965
Mohammad Ali MoniArtificial Intelligence & Digital Health, School of Health and Rehabilitation Sciences, Faculty of Health and Behavioural Sciences, The University of Queensland, St. Lucia, QLD 4072, Australia.ORCID 0000-0003-0756-1006
Bangladesh Centre for Advanced Studies · BDAmerican International University-Bangladesh · BDUniversity of Saskatchewan · CADaffodil International University · BDThe University of Queensland · AUUmm al-Qura University · SA

Funding

Deanship of Scientific Research at Umm Al-Qura University 23UQU4340560DSR12Natural Sciences and Engineering Research Council N/A
6 · The paper itself

Abstract

Osteosarcoma is the most common type of bone cancer that tends to occur in teenagers and young adults. Due to crowded context, inter-class similarity, inter-class variation, and noise in H&E-stained (hematoxylin and eosin stain) histology tissue, pathologists frequently face difficulty in osteosarcoma tumor classification. In this paper, we introduced a hybrid framework for improving the efficiency of three types of osteosarcoma tumor (nontumor, necrosis, and viable tumor) classification by merging different types of CNN-based architectures with a multilayer perceptron (MLP) algorithm on the WSI (whole slide images) dataset. We performed various kinds of preprocessing on the WSI images. Then, five pre-trained CNN models were trained with multiple parameter settings to extract insightful features via transfer learning, where convolution combined with pooling was utilized as a feature extractor. For feature selection, a decision tree-based RFE was designed to recursively eliminate less significant features to improve the model generalization performance for accurate prediction. Here, a decision tree was used as an estimator to select the different features. Finally, a modified MLP classifier was employed to classify binary and multiclass types of osteosarcoma under the five-fold CV to assess the robustness of our proposed hybrid model. Moreover, the feature selection criteria were analyzed to select the optimal one based on their execution time and accuracy. The proposed model achieved an accuracy of 95.2% for multiclass classification and 99.4% for binary classification. Experimental findings indicate that our proposed model significantly outperforms existing methods; therefore, this model could be applicable to support doctors in osteosarcoma diagnosis in clinics. In addition, our proposed model is integrated into a web application using the FastAPI web framework to provide a real-time prediction.

Indexed as

convolutional neural networksfeature extractionfeature selectionmachine learningMLPosteosarcomatransfer learning

Identifiers

PMID37371001
PMCPMC10297313
OpenAlexW4381165878

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.