Evidence map›Paper›PMID 37369672›Full record

ArticleScientific reports2023

Comparing mechanism-based and machine learning models for predicting the effects of glucose accessibility on tumor cell proliferation.

Jianchen Yang, Jack Virostko, Junyan Liu, Angela M Jarrett, David A Hormuth, Thomas E Yankeelov

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Knowledge-Informed Machine Learning for Cancer Diagnosis and Prognosis: A Review.IEEE transactions on automation science and engineering : a publication of the IEEE Robotics and Automation Society · 2025
    Article
  2. Article
  3. The regulatory roles and clinical significance of glycolysis in tumor.Cancer communications (London, England) · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jianchen YangDepartment of Biomedical Engineering, The University of Texas at Austin, 107 W. Dean Keaton, BME Building, 1 University Station, C0800, Austin, TX, 78712, USA.
Jack VirostkoDepartment of Diagnostic Medicine, The University of Texas at Austin, Austin, TX, 78712, USA.
Junyan LiuDepartment of Biomedical Engineering, The University of Texas at Austin, 107 W. Dean Keaton, BME Building, 1 University Station, C0800, Austin, TX, 78712, USA.
Angela M JarrettOden Institute for Computational Engineering and Sciences, The University of Texas at Austin, Austin, TX, 78712, USA.
David A HormuthOden Institute for Computational Engineering and Sciences, The University of Texas at Austin, Austin, TX, 78712, USA.
Thomas E YankeelovDepartment of Biomedical Engineering, The University of Texas at Austin, 107 W. Dean Keaton, BME Building, 1 University Station, C0800, Austin, TX, 78712, USA. thomas.yankeelov@utexas.edu.
Livestrong Foundation · USThe University of Texas at Austin · US

Funding

Quantitative Multiscale Imaging to Optimize Cancer Treatment StrategiesR01CA186193 · NCI · VANDERBILT UNIVERSITY · PI QUARANTA, VITO, RERICHA, ERIN C · 2014 to 2019
$3.1M
Using label-free Raman microscopy to predict therapeutic resistance of TNBC cellsU01CA253540 · NCI · UNIVERSITY OF TEXAS AT AUSTIN · PI BROCK, AMY, YANKEELOV, THOMAS E · 2020 to 2024
$2.1M
NCI NIH HHS R01 CA186193NCI NIH HHS U01 CA253540NIH HHS U01CA253540
6 · The paper itself

Abstract

Glucose plays a central role in tumor metabolism and development and is a target for novel therapeutics. To characterize the response of cancer cells to blockade of glucose uptake, we collected time-resolved microscopy data to track the growth of MDA-MB-231 breast cancer cells. We then developed a mechanism-based, mathematical model to predict how a glucose transporter (GLUT1) inhibitor (Cytochalasin B) influences the growth of the MDA-MB-231 cells by limiting access to glucose. The model includes a parameter describing dose dependent inhibition to quantify both the total glucose level in the system and the glucose level accessible to the tumor cells. Four common machine learning models were also used to predict tumor cell growth. Both the mechanism-based and machine learning models were trained and validated, and the prediction error was evaluated by the coefficient of determination (R

Indexed as

Breast NeoplasmsGlucoseCell ProliferationFemaleHumansMachine LearningModels, TheoreticalGlucose

Identifiers

PMID37369672
PMCPMC10300192
OpenAlexW4382343919

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.