Evidence map›Paper›PMID 37368909›Full record

ArticleJournal of experimental botany2023

The extensin protein SAE1 plays a role in leaf senescence and is targeted by the ubiquitin ligase SINA4 in tomato.

Han Lu, Xiangli Niu, Youhong Fan, Yulin Yuan, Li Huang, Bingyu Zhao, Yongsheng Liu, Fangming Xiao

Abstract read
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In one paragraph

Article in Journal of experimental botany, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Extensin and senescence: a cell wall connection.Journal of experimental botany · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Han LuSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, Anhui 230009, China.
Xiangli NiuSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, Anhui 230009, China.
Youhong FanInstitute of Plant Biology, School of Life Sciences, Fudan University, Shanghai, 200438, China.ORCID 0000-0001-9990-3258
Yulin YuanDepartment of Plant Sciences, University of Idaho, Moscow, Idaho, 83844, USA.
Li HuangDepartment of Plant Sciences, University of Idaho, Moscow, Idaho, 83844, USA.
Bingyu ZhaoSchool of Plant and Environmental Sciences, Virginia Polytechnic Institute and State University, Blacksburg, Virginia, 24061, USA.ORCID 0000-0002-5392-0279
Yongsheng LiuSchool of Food and Biological Engineering, Hefei University of Technology, Hefei, Anhui 230009, China.
Fangming XiaoDepartment of Plant Sciences, University of Idaho, Moscow, Idaho, 83844, USA.
University of Idaho · USAnhui Agricultural University · CNFudan University · CNVirginia Tech · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extensins are hydroxyproline-rich glycoproteins and generally play a structural role in cell wall integrity. In this study, we determined a novel role of tomato (Solanum lycopersicum) SENESCENCE-ASSOCIATED EXTENSIN1 (SAE1) in leaf senescence. Both gain- and loss-of-function analyses suggest that SAE1 plays a positive role in leaf senescence in tomato. Transgenic plants overexpressing SAE1 (SAE1-OX) exhibited premature leaf senescence and enhanced dark-induced senescence, whereas SAE1 knockout (SAE1-KO) plants displayed delayed development-dependent and dark-induced leaf senescence. Heterologous overexpression of SlSAE1 in Arabidopsis also led to premature leaf senescence and enhanced dark-induced senescence. In addition, the SAE1 protein was found to interact with the tomato ubiquitin ligase SlSINA4, and SlSINA4 promoted SAE1 degradation in a ligase-dependent manner when co-expressed in Nicotiana benthamiana leaves, suggesting that SlSINA4 controls SAE1 protein levels via the ubiquitin-proteasome pathway. Introduction of an SlSINA4-overexpression construct into the SAE1-OX tomato plants consistently completely eliminated accumulation of the SAE1 protein and suppressed the phenotypes conferred by overexpression of SAE1. Taken together, our results suggest that the tomato extensin SAE1 plays a positive role in leaf senescence and is regulated by the ubiquitin ligase SINA4.

Indexed as

ArabidopsisSolanum lycopersicumGene Expression Regulation, PlantLigasesPlant LeavesPlant SenescenceUbiquitinLigasesUbiquitinCRISPR-Cas9extensinleaf senescenceSolanum lycopersicumtomatoubiquitinationubiquitin ligase

Identifiers

PMID37368909
OpenAlexW4382193352

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.