Evidence map›Paper›PMID 37361575›Full record

ArticleFrontiers in oncology2023

Immune cell proportions correlate with clinicogenomic features and

Kyle A Romine, Daniel Bottomly, William Yashar, Nicola Long, Matthew Viehdorfer, Shannon K McWeeney, Jeffrey W Tyner

Open access · goldAbstract read
In one paragraph

Article in Frontiers in oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Kyle A RomineKnight Cancer Institute, Oregon Health & Science University, Portland, OR, United States.
Daniel BottomlyKnight Cancer Institute, Oregon Health & Science University, Portland, OR, United States.
William YasharKnight Cancer Institute, Oregon Health & Science University, Portland, OR, United States.
Nicola LongKnight Cancer Institute, Oregon Health & Science University, Portland, OR, United States.
Matthew ViehdorferKnight Cancer Institute, Oregon Health & Science University, Portland, OR, United States.
Shannon K McWeeneyKnight Cancer Institute, Oregon Health & Science University, Portland, OR, United States.
Jeffrey W TynerKnight Cancer Institute, Oregon Health & Science University, Portland, OR, United States.
Oregon Health & Science University · US

Funding

Tumor Intrinsic and Microenvironmental Mechanisms Driving Drug Combination Efficacy and Resistance in AMLU54CA224019 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI BRIAN J DRUKER, Shannon K. McWeeney · 2017 to 2026
$13.9M
NCI NIH HHS U54 CA224019
6 · The paper itself

Abstract

Introduction: The implementation of small-molecule and immunotherapies in acute myeloid leukemia (AML) has been challenging due to genetic and epigenetic variability amongst patients. There are many potential mechanisms by which immune cells could influence small-molecule or immunotherapy responses, yet, this area remains understudied. Methods: Here we performed cell type enrichment analysis from over 560 AML patient bone marrow and peripheral blood samples from the Beat AML dataset to describe the functional immune landscape of AML. Results: We identify multiple cell types that significantly correlate with AML clinical and genetic features, and we also observe significant correlations of immune cell proportions with Discussion: Our work, which is accessible through a new "Cell Type" module in our visualization platform (Vizome; http://vizome.org/), can be leveraged to investigate potential contributions of different immune cells on many facets of the biology of AML.

Indexed as

AML – acute myeloid leukemiacheckpoint inhibition therapyfunctional genomic dataimmune therapeuticsRNAseq analysis

Identifiers

PMID37361575
PMCPMC10285384
OpenAlexW4380049849

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.