Evidence map›Paper›PMID 37359721›Full record

ArticleBioinformatics advances2023

IsoAnalytics: a single-cell proteomics web server.

Suzette N Palmer, Andrew Y Koh, Xiaowei Zhan

Abstract read
In one paragraph

Article in Bioinformatics advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors.

Suzette N PalmerDivision of Hematology/Oncology, Department of Pediatrics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID https://orcid.org/0000-0001-8376-3633
Andrew Y KohDivision of Hematology/Oncology, Department of Pediatrics, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Xiaowei ZhanPeter O'Donnell Jr. School of Public Health, Quantitative Biomedical Research Center, Center for the Genetics and Host Defense, The University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.ORCID https://orcid.org/0000-0002-6249-7193

Funding

INTEGRATIVE IMMUNOLOGY TRAINING PROGRAMT32AI005284 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI Nan Yan · 2003 to 2026
$7.4M
Methods to unveil sex-specific genetic architecture in trans-ancestry meta-analysisR01HG011035 · NHGRI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI Bibo Jiang · 2022 to 2026
$3.8M
Role of Gut Microbiota in Modulating Immune Checkpoint Inhibitory Therapy for CancerR01CA231303 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI HOMSI, JADE, KOH, ANDREW · 2019 to 2023
$3.1M
Candida Albicans Gastrointestinal Colonization and DisseminationR01AI123163 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI KOH, ANDREW · 2016 to 2020
$2.0M
Mentoring Patient Oriented Research in the Microbiome of Cancer and Stem Cell Transplant PatientsK24AI150992 · NIAID · UT SOUTHWESTERN MEDICAL CENTER · PI KOH, ANDREW · 2020 to 2024
$592k
Methods to Identify, Validate & Interpret GWAS Loci in Multi-ethnic Meta-analysisR56HG011035 · NHGRI · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI LIU, DAJIANG · 2021 to 2021
$576k
NCI NIH HHS R01 CA231303NHGRI NIH HHS R01 HG011035NHGRI NIH HHS R56 HG011035NIAID NIH HHS K24 AI150992NIAID NIH HHS R01 AI123163NIAID NIH HHS T32 AI005284
6 · The paper itself

Abstract

Motivation: Single-cell proteomics provide unprecedented resolution to examine biological processes. Customized data analysis and facile data visualization are crucial for scientific discovery. Further, user-friendly data analysis and visualization software that is easily accessible for the general scientific community is essential. Results: We have created a web server, Availability and implementation: IsoAnalytics is free and available at: https://cdc.biohpc.swmed.edu/isoplexis/ and is implemented in Python, with all major browsers supported. Code for IsoAnalytics is free and available at: https://github.com/zhanxw/Isoplexis_Data_Analysis. Supplementary information: Supplementary data are available at

Identifiers

PMID37359721
PMCPMC10290237

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.