Evidence map›Paper›PMID 37358939›Full record

ArticleNeuro-oncology advances

Deep proteome investigation of high-grade gliomas reveals heterogeneity driving differential metabolism of 5-aminolevulinic acid.

Saicharan Ghantasala, Amruth Bhat, Unnati Agarwal, Deeptarup Biswas, Prawesh Bhattarai, Sridhar Epari, Aliasgar Moiyadi, Sanjeeva Srivastava

Open access · goldAbstract read
In one paragraph

Article in Neuro-oncology advances. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.4field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Saicharan GhantasalaCentre for Research in Nano Technology and Sciences, Indian Institute of Technology Bombay, Mumbai, India.
Amruth BhatCentre for BioSystems Science and Engineering, Indian Institute of Science, Bengaluru, India.
Unnati AgarwalDepartment of Biotechnology, School of Bioengineering and Biosciences, Lovely Professional University, Phagwara, India.
Deeptarup BiswasDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.
Prawesh BhattaraiSchool of Biosciences and Technology, Vellore Institute of Technology, Vellore, India.
Sridhar EpariDepartment of Pathology, Tata Memorial Centre's-Advanced Centre for Treatment, Research and Education in Cancer, Navi Mumbai, India.
Aliasgar MoiyadiHomi Bhabha National Institute, Mumbai, India.
Sanjeeva SrivastavaDepartment of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Mumbai, India.
Indian Institute of Technology Bombay · INHomi Bhabha National Institute · INIndian Institute of Science Bangalore · INLovely Professional University · INVellore Institute of Technology University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Fluorescence-guided surgery (FGS) using 5-aminolevulinic acid (5-ALA) as adjunct for high-grade gliomas (HGGs) has been on the rise in recent years. Despite being largely effective, we observed multiple histologically similar sub-regions of the same tumor from a few individuals with varying protoporphyrin IX (PpIX) levels. The current study aims at understanding the proteomic changes driving differential metabolism of 5-ALA in HGGs. Methods: Biopsies were histologically and biochemically assayed. Following this, a deep proteomics investigation was carried out using high resolution liquid chromatography-mass spectrometry (HR LC-MS) to identify protein expression in differentially fluorescing regions of HGGs. Results: Our analysis identified 5437 proteins with high confidence. Differential analysis in the subgroup with HGGs carrying IDH mutation (IDH mt.) revealed 93 differentially regulated proteins (raw p-value ≤ 0.05 and absolute FC ≥ 1.5). Similar analysis in the IDH wild type (IDH wt.) subgroup revealed 20 differentially regulated proteins. Gene set enrichment analysis (GSEA) identified key pathways like ion channel transport, trafficking of AMPA receptors, and regulation of heme-oxygenase-1 in the IDH wt. subgroup. Pathways such as scavenging of heme, signaling by NOTCH4, negative regulation of PI3-AKT pathway, and iron uptake and transport were observed to be differentially regulated in the IDH mt. subgroup. Conclusions: Tumor regions from the same patient exhibiting differential fluorescence following 5-ALA administration were observed to have different proteome profiles. Future studies aimed at a better molecular understanding of 5-ALA metabolism in HGGs hold the potential to increase the efficacy of FGS and the use of 5-ALA as a theragnostic tool.

Indexed as

5-ALAdeep proteomeGSEAheme biosynthesisHR LC–MS

Identifiers

PMID37358939
PMCPMC10290514
OpenAlexW4380838081

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