Evidence map›Paper›PMID 37355664›Full record

ArticleScientific reports2023

Identification of hub genes and potential ceRNA networks of diabetic cardiomyopathy.

Jun Hou, Wan Yi Liang, Shiqiang Xiong, Pan Long, Tian Yue, Xudong Wen, Tianchen Wang, Haoyu Deng

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Construction of a potentially functional long noncoding RNA-microRNA-mRNA network in diabetic cardiomyopathy.Journal of research in medical sciences : the official journal of Isfahan University of Medical Sciences · 2024
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Jun Hou *Department of Cardiology, The Third People's Hospital of Chengdu/Affiliated Hospital of Southwest Jiaotong University, Chengdu, Sichuan, China.
Wan Yi Liang *Department of Microbiology and Immunology, Faculty of Science, University of British Columbia, Vancouver, BC, Canada.
Shiqiang Xiong *Department of Cardiology, The Third People's Hospital of Chengdu/Affiliated Hospital of Southwest Jiaotong University, Chengdu, Sichuan, China.
Pan LongSchool of Life Science and Engineering, Southwest Jiaotong University, Chengdu, Sichuan, China.
Tian YueSchool of Life Science and Engineering, Southwest Jiaotong University, Chengdu, Sichuan, China.
Xudong WenDepartment of Gastroenterology and Hepatology, Chengdu First People's Hospital, Chengdu, Sichuan, China.
Tianchen WangAlfred E. Mann Department of Biomedical Engineering, University of South California, Los Angeles, CA, USA.
Haoyu DengDepartment of Medicine, Faculty of Medicine, University of British Columbia, Vancouver, BC, Canada. eric.deng@hli.ubc.ca.
Southwest Jiaotong University · CNUniversity of British Columbia · CAThird People's Hospital of Chengdu · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diabetic cardiomyopathy (DCM), a common complication of diabetes, is defined as ventricular dysfunction in the absence of underlying heart disease. Noncoding RNAs (ncRNAs), including long noncoding RNAs (lncRNAs) and microRNAs (miRNAs), play a crucial role in the development of DCM. Weighted Gene Co-Expression Network Analysis (WGCNA) was used to identify key modules in DCM-related pathways. DCM-related miRNA-mRNA network and DCM-related ceRNA network were constructed by miRNA-seq to identify hub genes in these modules. We identified five hub genes that are associated with the onset of DCM, including Troponin C1 (Tnnc1), Phospholamban (Pln), Fatty acid binding proteins 3 (Fabp3), Popeye domain containing 2 (Popdc2), and Tripartite Motif-containing Protein 63 (Trim63). miRNAs that target the hub genes were mainly involved in TGF-β and Wnt signaling pathways. GO BP enrichment analysis found these miRNAs were involved in the signaling of TGF-β and glucose homeostasis. Q-PCR results found the gene expressions of Pln, Fabp3, Trim63, Tnnc1, and Popdc2 were significantly increased in DCM. Our study identified five hub genes (Tnnc1, Pln, Fabp3, Popdc2, Trim63) whose associated ceRNA networks are responsible for the onset of DCM.

Indexed as

Diabetes MellitusDiabetic CardiomyopathiesMicroRNAsRNA, Long NoncodingGene Regulatory NetworksHumansRNA, MessengerWnt Signaling PathwayMicroRNAsRNA, Long NoncodingRNA, Messenger

Identifiers

PMID37355664
PMCPMC10290640
OpenAlexW4381943552

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.