ArticleScientific data2023
Biodiversity of Philippine marine fishes: A DNA barcode reference library based on voucher specimens.
Article in Scientific data, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
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14 citing papers in PubMed.
- Systematic revision of east African Oligolepis (Oxudercidae: Gobionellinae) reveals a distinct species, Oligolepis goni sp. nov., formerly assigned to Oligolepis acutipennis (Valenciennes, 1837).Journal of fish biology · 2026Article
- The Niebuhr net: A net for capturing benthopelagic fish and fauna with towed camera systems.HardwareX · 2026Article
- Biodiversity of Hong Kong purse seine fisheries: An integrated DNA barcode reference library.Scientific data · 2026Article
- Revised diagnosis of the flathead genusZooKeys · 2026Article
- Unlocking natural history collections to improve eDNA reference databases and biodiversity monitoring.Bioscience · 2025Article
- DNA Barcoding of Teleost Fishes from North Luzon, Philippines: A Dataset for Ichthyofaunal Diversity Assessment.Scientific data · 2025Article
- Fish databases for improving their conservation in Colombia.Scientific data · 2025Article
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- Efficient species identification for Pacific salmon genetic monitoring programs.Evolutionary applications · 2024Article
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- Characteristics of the complete mitochondrial genome ofMitochondrial DNA. Part B, Resources · 2024Article
- An Odyssey of Integrative Taxonomy Unveils Marine Fish Diversity, New Records and Cryptic Species in Malaysian Waters.Zoological studies · 2024Article
- DNA barcoding of marine teleost fishes (Teleostei) in Cebu, the Philippines, a biodiversity hotspot of the coral triangle.Scientific reports · 2023Article
- Biodiversity of Philippine marine fishes: A DNA barcode reference library based on voucher specimens.Scientific data · 2023Article
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Authors and funding
12 authors.
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Abstract
Accurate identification of fishes is essential for understanding their biology and to ensure food safety for consumers. DNA barcoding is an important tool because it can verify identifications of both whole and processed fishes that have had key morphological characters removed (e.g., filets, fish meal); however, DNA reference libraries are incomplete, and public repositories for sequence data contain incorrectly identified sequences. During a nine-year sampling program in the Philippines, a global biodiversity hotspot for marine fishes, we developed a verified reference library of cytochrome c oxidase subunit I (COI) sequences for 2,525 specimens representing 984 species. Specimens were primarily purchased from markets, with additional diversity collected using rotenone or fishing gear. Species identifications were verified based on taxonomic, phenotypic, and genotypic data, and sequences are associated with voucher specimens, live-color photographs, and genetic samples catalogued at Smithsonian Institution, National Museum of Natural History. The Biodiversity of Philippine Marine Fishes dataset is released herein to increase knowledge of species diversity and distributions and to facilitate accurate identification of market fishes.
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