Evidence map›Paper›PMID 37354256›Full record

ArticleParasitology research2023

Detection of SNPs and benzimidazole resistance in strongyle nematode eggs of horses by allele-specific PCR.

Zuhal Onder, Alparslan Yildirim, Onder Duzlu, Arif Ciloglu, Gamze Yetismis, Faruk Karabulut, Abdullah Inci

Abstract read
PubMed Publisher
In one paragraph

Article in Parasitology research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Zuhal OnderDepartment of Parasitology, Faculty of Veterinary Medicine, Erciyes University, 38280, Kayseri, Turkey. zuhalbiskin@erciyes.edu.tr.ORCID http://orcid.org/0000-0002-6143-3630
Alparslan YildirimDepartment of Parasitology, Faculty of Veterinary Medicine, Erciyes University, 38280, Kayseri, Turkey.
Onder DuzluDepartment of Parasitology, Faculty of Veterinary Medicine, Erciyes University, 38280, Kayseri, Turkey.
Arif CilogluDepartment of Parasitology, Faculty of Veterinary Medicine, Erciyes University, 38280, Kayseri, Turkey.
Gamze YetismisDepartment of Parasitology, Faculty of Veterinary Medicine, Erciyes University, 38280, Kayseri, Turkey.
Faruk KarabulutDepartment of Parasitology, Faculty of Veterinary Medicine, Erciyes University, 38280, Kayseri, Turkey.
Abdullah InciDepartment of Parasitology, Faculty of Veterinary Medicine, Erciyes University, 38280, Kayseri, Turkey.
Erciyes University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study was conducted to determine single nucleotide polymorphisms (SNPs) and the benzimidazole (BZ) resistance in strongyle nematode egg populations in horses using molecular techniques. A total of 200 fecal samples were collected from horses in 26 farms in two provinces (Kayseri and Nevşehir) of the Central Anatolia Region of Türkiye between May and August 2022. The flotation method was used to detect strongyle nematode eggs in the fecal samples of the horses. Afterward, strongyle nematode eggs were collected, and the allele-specific polymerase chain reaction (AS-PCR) technique was used to detect the BZ resistance. BZ-susceptible and BZ-resistant PCR products were sequenced to determine single nucleotide polymorphisms (SNPs) in the β-tubulin isotype 1 gene. The strongyle nematode eggs were determined in 85 (42.5%) out of 200 fecal samples. AS-PCR detected 50.58% (43/85) BZ-resistant (homozygous resistant) and 36.4% (31/85) BZ-susceptible (homozygous susceptible) genes in the strongyle eggs. Both BZ-resistant and BZ-susceptible genes (heterozygous) were determined in 11 samples. BZ-resistant and BZ-susceptible allele frequencies were determined as 57.0% (48.5/85) and 43.0% (36.5/85), respectively. SNPs were detected only in codon 200 of the β-tubulin isotype 1 gene in four sequenced isolates of the two resistant and two susceptible isolates. This study is the first molecular report on BZ resistance in strongyle nematode eggs in horses in Türkiye. The widespread prevalence of BZ-resistant alleles in equine strongyle nematodes shows the requirement for the immediate usage of other anthelmintics instead of the BZ group drugs for the effective management and control of equine strongyle nematodes.

Indexed as

AnthelminticsNematodaStrongyle Infections, EquineAllelesAnimalsBenzimidazolesDrug ResistanceHorsesPolymerase Chain ReactionPolymorphism, Single NucleotideTubulinAnthelminticsBenzimidazolesTubulinBenzimidazole resistanceHorseSingle nucleotide polymorphismStrongyle nematode egg

Identifiers

PMID37354256
OpenAlexW4381857291

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.