Evidence map›Paper›PMID 37353650›Full record

ArticleScientific reports2023

Imaging conformations of holo- and apo-transferrin on the single-molecule level by low-energy electron holography.

Hannah Ochner, Sven Szilagyi, Moritz Edte, Tim K Esser, Stephan Rauschenbach, Luigi Malavolti, Klaus Kern

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Tailoring lipid nanoparticles for T-cell targeting in allergic asthma: Insights into efficacy and specificity.European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Hannah OchnerMax Planck Institute for Solid State Research, Heisenbergstr. 1, 70569, Stuttgart, Germany. h.ochner@fkf.mpg.de.
Sven SzilagyiMax Planck Institute for Solid State Research, Heisenbergstr. 1, 70569, Stuttgart, Germany.
Moritz EdteMax Planck Institute for Solid State Research, Heisenbergstr. 1, 70569, Stuttgart, Germany.
Tim K EsserDepartment of Chemistry, University of Oxford, 12 Mansfield Road, Oxford, OX1 3TA, UK.
Stephan RauschenbachMax Planck Institute for Solid State Research, Heisenbergstr. 1, 70569, Stuttgart, Germany.
Luigi MalavoltiMax Planck Institute for Solid State Research, Heisenbergstr. 1, 70569, Stuttgart, Germany. l.malavolti@fkf.mpg.de.ORCID 0000-0003-4644-7644
Klaus KernMax Planck Institute for Solid State Research, Heisenbergstr. 1, 70569, Stuttgart, Germany.ORCID 0000-0002-1785-7874
Max Planck Institute for Solid State Research · DEUniversity of Oxford · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Conformational changes play a key role in the biological function of many proteins, thereby sustaining a multitude of processes essential to life. Thus, the imaging of the conformational space of proteins exhibiting such conformational changes is of great interest. Low-energy electron holography (LEEH) in combination with native electrospray ion beam deposition (ES-IBD) has recently been demonstrated to be capable of exploring the conformational space of conformationally highly variable proteins on the single-molecule level. While the previously studied conformations were induced by changes in environment, it is of relevance to assess the performance of this imaging method when applied to protein conformations inherently tied to a function-related conformational change. We show that LEEH imaging can distinguish different conformations of transferrin, the major iron transport protein in many organisms, by resolving a nanometer-scale cleft in the structure of the iron-free molecule (apo-transferrin) resulting from the conformational change associated with the iron binding/release process. This, along with a statistical analysis of the data, which evidences a degree of flexibility of the molecules, indicates that LEEH is a viable technique for imaging function-related conformational changes in individual proteins.

Indexed as

HolographyTransferrinElectronsProtein ConformationTransferrin

Identifiers

PMID37353650
PMCPMC10290138
OpenAlexW4381803165

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.