Evidence map›Paper›PMID 37351109›Full record

ArticleFrontiers in endocrinology2023

Machine learning immune-related gene based on KLRB1 model for predicting the prognosis and immune cell infiltration of breast cancer.

Guo Huang, Shuhui Xiao, Zhan Jiang, Xue Zhou, Li Chen, Lin Long, Sheng Zhang, Ke Xu, Juan Chen, Bin Jiang

Open access · goldAbstract read
In one paragraph

Article in Frontiers in endocrinology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 19 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Guo HuangHengyang Medical School, University of South China, Hengyang, Hunan, China.
Shuhui XiaoDepartment of Oncology, Chongqing General Hospital, Chongqing, China.
Zhan JiangDepartment of Oncology, Chongqing General Hospital, Chongqing, China.
Xue ZhouDepartment of Oncology, The Affiliated Hospital of Southwest Medical University, Luzhou, China.
Li ChenDepartment of Ultrasonography, Chengdu First People's Hospital, Chengdu, China.
Lin LongHengyang Medical School, University of South China, Hengyang, Hunan, China.
Sheng ZhangDepartment of Radiology, Nanchong Central Hospital, The Second Clinical Medical College, North Sichuan Medical College, Nanchong, China.
Ke XuDepartment of Oncology, Chongqing General Hospital, Chongqing, China.
Juan ChenThe Second Affiliated Hospital, Department of Radiotherapy, Hengyang Medical School, University of South China, Hengyang, Hunan, China.
Bin JiangThe Second Affiliated Hospital, Department of Burn and Plastic Surgery, Hengyang Medical School, University of South China, Hengyang, Hunan, China.
University of South China · CNFirst People's Hospital of Chongqing · CNAffiliated Hospital of Southwest Medical University · CNFirst Affiliated Hospital of Chengdu Medical College · CNNanchong Central Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: Breast cancer is a prevalent malignancy that predominantly affects women. The development and progression of this disease are strongly influenced by the tumor microenvironment and immune infiltration. Therefore, investigating immune-related genes associated with breast cancer prognosis is a crucial approach to enhance the diagnosis and treatment of breast cancer. Methods: We analyzed data from the TCGA database to determine the proportion of invasive immune cells, immune components, and matrix components in breast cancer patients. Using this data, we constructed a risk prediction model to predict breast cancer prognosis and evaluated the correlation between KLRB1 expression and clinicopathological features and immune invasion. Additionally, we investigated the role of KLRB1 in breast cancer using various experimental techniques including real-time quantitative PCR, MTT assays, Transwell assays, Wound healing assays, EdU assays, and flow cytometry. Results: The functional enrichment analysis of immune and stromal components in breast cancer revealed that T cell activation, differentiation, and regulation, as well as lymphocyte differentiation and regulation, play critical roles in determining the status of the tumor microenvironment. These DEGs are therefore considered key factors affecting TME status. Additionally, immune-related gene risk models were constructed and found to be effective predictors of breast cancer prognosis. Further analysis through KM survival analysis and univariate and multivariate Cox regression analysis demonstrated that KLRB1 is an independent prognostic factor for breast cancer. KLRB1 is closely associated with immunoinfiltrating cells. Finally, Conclusion: KLRB1 may be a potential prognostic marker and therapeutic target associated with the microenzymic environment of breast cancer tumors, providing a new direction for breast cancer treatment.

Indexed as

Breast NeoplasmsBiological AssayCell DifferentiationDatabases, FactualFemaleHumansNK Cell Lectin-Like Receptor Subfamily BPrognosisTumor MicroenvironmentKLRB1 protein, humanNK Cell Lectin-Like Receptor Subfamily Bbreast cancerimmune infiltrationimmune-related geneKLRB1prognostic model

Identifiers

PMID37351109
PMCPMC10282768
OpenAlexW4379648604

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.