Evidence map›Paper›PMID 37345922›Full record

ArticlemBio2023

Structural disruption of Ntox15 nuclease effector domains by immunity proteins protects against type VI secretion system intoxication in Bacteroidales.

Dustin E Bosch, Romina Abbasian, Bishal Parajuli, S Brook Peterson, Joseph D Mougous

Open access · goldAbstract read
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  7. An electron transport complex required in the gut sensitizesProceedings of the National Academy of Sciences of the United States of America · 2025
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  13. Review
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  15. T6SS nuclease effectors inJournal of bacteriology · 2024
    Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Dustin E BoschDepartment of Pathology, Carver College of Medicine, University of Iowa , Iowa City, Iowa, USA.ORCID 0000-0002-7430-2939
Romina AbbasianDepartment of Pathology, Carver College of Medicine, University of Iowa , Iowa City, Iowa, USA.
Bishal ParajuliDepartment of Pathology, Carver College of Medicine, University of Iowa , Iowa City, Iowa, USA.
S Brook PetersonDepartment of Microbiology, University of Washington School of Medicine , Seattle, Washington, USA.
Joseph D MougousDepartment of Microbiology, University of Washington School of Medicine , Seattle, Washington, USA.
University of Iowa · USHoward Hughes Medical Institute · US

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI MARC ALLAIRE · 2017 to 2026
$28.6M
Type VI secretion effectors and interbacterial competition in vivoR01AI080609 · NIAID · YALE UNIVERSITY · PI MOUGOUS, JOSEPH DAVID · 2009 to 2025
$6.7M
Pilatus 6mS10OD021832 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ADAMS, PAUL DAVID · 2016 to 2016
$980k
Contact-dependent interbacterial responses modulate intestinal colonization by Bacteroides speciesK08AI159619 · NIAID · UNIVERSITY OF IOWA · PI BOSCH, DUSTIN E · 2021 to 2025
$807k
NIAID NIH HHS K08 AI159619NIAID NIH HHS R01 AI080609NIGMS NIH HHS P30 GM124169NIH HHS S10 OD021832
6 · The paper itself

Abstract

Bacteroidales use type VI secretion systems (T6SS) to competitively colonize and persist in the colon. We identify a horizontally transferred T6SS with Ntox15 family nuclease effector (Tde1) that mediates interbacterial antagonism among Bacteroidales, including several derived from a single human donor. Expression of cognate (Tdi1) or orphan immunity proteins in acquired interbacterial defense systems protects against Tde1-dependent attack. We find that immunity protein interaction induces a large effector conformational change in Tde nucleases, disrupting the active site and altering the DNA-binding site. Crystallographic snapshots of isolated Tde1, the Tde1/Tdi1 complex, and homologs from

Indexed as

Bacterial ProteinsType VI Secretion SystemsGene Transfer, HorizontalHumansBacterial ProteinsType VI Secretion SystemsBacteroidesinflammatory bowel diseasemicrobiomestructural biologytype VI secretion system

Identifiers

PMID37345922
PMCPMC10470768
OpenAlexW4381597351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.