Evidence map›Paper›PMID 37344444›Full record

ArticleMicrobes and environments2023

Light-driven Proton Pumps as a Potential Regulator for Carbon Fixation in Marine Diatoms.

Susumu Yoshizawa, Tomonori Azuma, Keiichi Kojima, Keisuke Inomura, Masumi Hasegawa, Yosuke Nishimura, Masuzu Kikuchi, Gabrielle Armin, Yuya Tsukamoto, Hideaki Miyashita and 6 more

Open access · diamondAbstract read
In one paragraph

Article in Microbes and environments, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Apusomonad rhodopsins: A new family of ultraviolet to blue light-absorbing rhodopsin channels.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Iron-limitation light switch.Nature microbiology · 2023
    Article
  8. Article
  9. Widespread use of proton-pumping rhodopsin in Antarctic phytoplankton.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Susumu YoshizawaAtmosphere and Ocean Research Institute, The University of Tokyo.
Tomonori AzumaGraduate School of Human and Environmental Studies, Kyoto University.
Keiichi KojimaSchool of Pharmaceutical Sciences, Okayama University.
Keisuke InomuraGraduate School of Oceanography, University of Rhode Island.
Masumi HasegawaAtmosphere and Ocean Research Institute, The University of Tokyo.
Yosuke NishimuraAtmosphere and Ocean Research Institute, The University of Tokyo.
Masuzu KikuchiSchool of Pharmaceutical Sciences, Okayama University.
Gabrielle ArminGraduate School of Oceanography, University of Rhode Island.
Yuya TsukamotoAtmosphere and Ocean Research Institute, The University of Tokyo.
Hideaki MiyashitaGraduate School of Human and Environmental Studies, Kyoto University.
Kentaro IfukuGraduate School of Agriculture, Kyoto University.
Takashi YamanoGraduate School of Biostudies, Kyoto University.
Adrian MarchettiDepartment of Earth, Marine and Environmental Sciences, University of North Carolina at Chapel Hill.
Hideya FukuzawaGraduate School of Biostudies, Kyoto University.
Yuki SudoSchool of Pharmaceutical Sciences, Okayama University.
Ryoma KamikawaGraduate School of Agriculture, Kyoto University.
Kyoto University · JPOkayama University · JPSphere Institute · USUniversity of Rhode Island · USThe University of Tokyo · JPUniversity of North Carolina at Chapel Hill · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diatoms are a major phytoplankton group responsible for approximately 20% of carbon fixation on Earth. They perform photosynthesis using light-harvesting chlo-rophylls located in plastids, an organelle obtained through eukaryote-eukaryote endosymbiosis. Microbial rhodopsin, a photoreceptor distinct from chlo-rophyll-based photosystems, was recently identified in some diatoms. However, the physiological function of diatom rhodopsin remains unclear. Heterologous expression techniques were herein used to investigate the protein function and subcellular localization of diatom rhodopsin. We demonstrated that diatom rhodopsin acts as a light-driven proton pump and localizes primarily to the outermost membrane of four membrane-bound complex plastids. Using model simulations, we also examined the effects of pH changes inside the plastid due to rhodopsin-mediated proton transport on photosynthesis. The results obtained suggested the involvement of rhodopsin-mediated local pH changes in a photosynthetic CO

Indexed as

DiatomsCarbonCarbon CyclePhotosynthesisPhytoplanktonProton PumpsRhodopsinCarbonProton PumpsRhodopsinCO2-concentrating mechanismdiatommarine microbiologymicrobial rhodopsins

Identifiers

PMID37344444
PMCPMC10308239
OpenAlexW4381161974

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.