Evidence map›Paper›PMID 37341859›Full record

ArticleMolecular neurobiology2023

Differential Expression of the β3 Subunit of Voltage-Gated Ca

Christina Kjær, Oana Palasca, Guido Barzaghi, Lasse K Bak, Rúna K J Durhuus, Emil Jakobsen, Louise Pedersen, Emil D Bartels, David P D Woldbye, Lars H Pinborg and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular neurobiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 3 countries.

Christina KjærBiomedical Laboratory Science, Department of Technology, Faculty of Health and Technology, University College Copenhagen, Sigurdsgade 26, 1St, 2200, Copenhagen, Denmark. chkj@kp.dk.ORCID http://orcid.org/0000-0002-2293-2365
Oana PalascaDisease Systems Biology Program, Faculty of Health and Medical Sciences, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.
Guido BarzaghiDepartment of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, 2100, Copenhagen, Denmark.
Lasse K BakDepartment of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, 2100, Copenhagen, Denmark.ORCID http://orcid.org/0000-0003-0784-7864
Rúna K J DurhuusDepartment of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, 2100, Copenhagen, Denmark.
Emil JakobsenDepartment of Drug Design and Pharmacology, Faculty of Health and Medical Sciences, University of Copenhagen, 2100, Copenhagen, Denmark.ORCID http://orcid.org/0000-0001-6290-4222
Louise PedersenBiomedical Laboratory Science, Department of Technology, Faculty of Health and Technology, University College Copenhagen, Sigurdsgade 26, 1St, 2200, Copenhagen, Denmark.
Emil D BartelsDept. of Clinical Biochemistry, 2600, RigshospitaletCopenhagen, Denmark.ORCID http://orcid.org/0000-0002-8290-5772
David P D WoldbyeDepartment of Neuroscience, University of Copenhagen, 2200, Copenhagen, Denmark.ORCID http://orcid.org/0000-0002-6321-3850
Lars H PinborgEpilepsy Clinic & Neurobiology Research Unit, Copenhagen University Hospital, University of Copenhagen, 2100, Copenhagen, Denmark.ORCID http://orcid.org/0000-0001-9024-7936
Lars Juhl JensenDisease Systems Biology Program, Faculty of Health and Medical Sciences, Novo Nordisk Foundation Center for Protein Research, University of Copenhagen, Copenhagen, Denmark.ORCID http://orcid.org/0000-0001-7885-715X
University of Copenhagen · DKRigshospitalet · DK

Funding

Novo Nordisk Fonden NNF14CC0001
6 · The paper itself

Abstract

The purpose of this study was to identify and validate new putative lead drug targets in drug-resistant mesial temporal lobe epilepsy (mTLE) starting from differentially expressed genes (DEGs) previously identified in mTLE in humans by transcriptome analysis. We identified consensus DEGs among two independent mTLE transcriptome datasets and assigned them status as "lead target" if they (1) were involved in neuronal excitability, (2) were new in mTLE, and (3) were druggable. For this, we created a consensus DEG network in STRING and annotated it with information from the DISEASES database and the Target Central Resource Database (TCRD). Next, we attempted to validate lead targets using qPCR, immunohistochemistry, and Western blot on hippocampal and temporal lobe neocortical tissue from mTLE patients and non-epilepsy controls, respectively. Here we created a robust, unbiased list of 113 consensus DEGs starting from two lists of 3040 and 5523 mTLE significant DEGs, respectively, and identified five lead targets. Next, we showed that CACNB3, a voltage-gated Ca

Indexed as

Drug Resistant EpilepsyEpilepsy, Temporal LobeHippocampusHumansSeizuresTemporal LobeCACNB3Mesial temporal lobe epilepsymTLETarget validationTranscriptome analysisUnbiased drug target identification

Identifiers

PMID37341859
PMCPMC10471638
OpenAlexW4381470444

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.