Evidence map›Paper›PMID 37341434›Full record

ArticleBiopolymers2024

Efficient production of fluorophore-labeled CC chemokines for biophysical studies using recombinant enterokinase and recombinant sortase.

Wenyan Guan, Ning Zhang, Arjan Bains, Mourad Sadqi, Cynthia M Dupureur, Patricia J LiWang

Open access · hybridAbstract read
In one paragraph

Article in Biopolymers, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Wenyan GuanMaterials and Biomaterials Science and Engineering, University of California Merced, Merced, California, USA.ORCID https://orcid.org/0000-0002-4304-2417
Ning ZhangQingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China.
Arjan BainsChemistry and Biochemistry, University of California Merced, Merced, California, USA.
Mourad SadqiBioengineering, CREST Center for Cellular and Biomolecular Machines, University of California Merced, Merced, California, USA.ORCID https://orcid.org/0000-0003-3553-3408
Cynthia M DupureurDepartment of Chemistry and Biochemistry, University of Missouri St. Louis, St. Louis, Missouri, USA.
Patricia J LiWangMolecular Cell Biology, Health Sciences Research Institute, University of California Merced, Merced, California, USA.ORCID https://orcid.org/0000-0002-9764-8246
University of California, Merced · USChinese Academy of Sciences · CNUniversity of Missouri–St. Louis · US

Funding

Silk-based Formulation for Microbicide DeliveryR01AI112011 · NIAID · UNIVERSITY OF CALIFORNIA, MERCED · PI LIWANG, PATRICIA J · 2014 to 2017
$2.3M
NIAID NIH HHS R01 AI112011NIH HHS 1R01AI112011
6 · The paper itself

Abstract

Chemokines are important immune system proteins, many of which mediate inflammation due to their function to activate and cause chemotaxis of leukocytes. An important anti-inflammatory strategy is therefore to bind and inhibit chemokines, which leads to the need for biophysical studies of chemokines as they bind various possible partners. Because a successful anti-chemokine drug should bind at low concentrations, techniques such as fluorescence anisotropy that can provide nanomolar signal detection are required. To allow fluorescence experiments to be carried out on chemokines, a method is described for the production of fluorescently labeled chemokines. First, a fusion-tagged chemokine is produced in Escherichia coli, then efficient cleavage of the N-terminal fusion partner is carried out with lab-produced enterokinase, followed by covalent modification with a fluorophore, mediated by the lab-produced sortase enzyme. This overall process reduces the need for expensive commercial enzymatic reagents. Finally, we utilize the product, vMIP-fluor, in binding studies with the chemokine binding protein vCCI, which has great potential as an anti-inflammatory therapeutic, showing a binding constant for vCCI:vMIP-fluor of 0.37 ± 0.006 nM. We also show how a single modified chemokine homolog (vMIP-fluor) can be used in competition assays with other chemokines and we report a K

Indexed as

Chemokines, CCEnteropeptidaseAnti-Inflammatory AgentsChemokinesHumansInflammationAnti-Inflammatory AgentsChemokinesChemokines, CCEnteropeptidasechemokinesenterokinasefluorescence anisotropysortasevCCI

Identifiers

PMID37341434
PMCPMC10733556
OpenAlexW4381469345

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.