Evidence map›Paper›PMID 37340986›Full record

ArticleSoft matter2023

Effects of solvent conditions on the self-assembly of heterotrimeric collagen-like peptide (CLP) triple helices: a coarse-grained simulation study.

Phillip A Taylor, Stephen Kronenberger, April M Kloxin, Arthi Jayaraman

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Soft matter, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Phillip A TaylorDepartment of Chemical and Biomolecular Engineering, University of Delaware, Colburn Lab, 150 Academy St, Newark, DE 19716, USA. arthij@udel.edu.ORCID http://orcid.org/0000-0003-4775-2341
Stephen KronenbergerDepartment of Chemical and Biomolecular Engineering, University of Delaware, Colburn Lab, 150 Academy St, Newark, DE 19716, USA. arthij@udel.edu.ORCID http://orcid.org/0000-0002-7084-4060
April M KloxinDepartment of Chemical and Biomolecular Engineering, University of Delaware, Colburn Lab, 150 Academy St, Newark, DE 19716, USA. arthij@udel.edu.ORCID http://orcid.org/0000-0002-4594-2953
Arthi JayaramanDepartment of Chemical and Biomolecular Engineering, University of Delaware, Colburn Lab, 150 Academy St, Newark, DE 19716, USA. arthij@udel.edu.ORCID http://orcid.org/0000-0002-5295-4581
DuPont (United States) · USUniversity of Delaware · US

Funding

Chemistry-Biology Interface Predoctoral Training Grant 2024-2029T32GM133395 · NIGMS · UNIVERSITY OF DELAWARE · PI Catherine Leimkuhler Grimes · 2019 to 2026
$3.7M
Unraveling fibrosis with dynamic microenvironments and molecular toolsDP2HL152424 · NHLBI · UNIVERSITY OF DELAWARE · PI KLOXIN, APRIL M · 2019 to 2019
$2.4M
NHLBI NIH HHS DP2 HL152424NIGMS NIH HHS T32 GM133395
6 · The paper itself

Abstract

We perform coarse-grained (CG) molecular dynamics (MD) simulations to investigate the self-assembly of collagen-like peptide (CLP) triple helices into fibrillar structures and percolated networks as a function of solvent quality. The focus of this study is on CLP triple helices whose strands are different lengths (

Indexed as

CollagenPeptidesMolecular Dynamics SimulationProtein Structure, SecondarySolventsCollagenPeptidesSolvents

Identifiers

PMID37340986
PMCPMC10560457
OpenAlexW4380031969

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.