Evidence map›Paper›PMID 37337105›Full record

ArticleNature genetics2023

Transcriptomic classes of BCR-ABL1 lymphoblastic leukemia.

Jaeseung C Kim, Michelle Chan-Seng-Yue, Sabrina Ge, Andy G X Zeng, Karen Ng, Olga I Gan, Laura Garcia-Prat, Eugenia Flores-Figueroa, Tristan Woo, Amy Xin Wei Zhang and 14 more

Abstract read
In one paragraph

Article in Nature genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

  1. Trial
  2. Review
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  4. Review
  5. Article
  6. Two episodes of PhHaematologica · 2026
    Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Uncommon phenotypes ofHaematologica · 2025
    Review
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Jaeseung C KimPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Michelle Chan-Seng-YuePrincess Margaret Cancer Centre, Toronto, Ontario, Canada.ORCID 0000-0003-3773-9354
Sabrina GePrincess Margaret Cancer Centre, Toronto, Ontario, Canada.ORCID 0000-0002-0242-753X
Andy G X ZengPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Karen NgPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Olga I GanPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Laura Garcia-PratPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Eugenia Flores-FigueroaPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Tristan WooPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.ORCID 0000-0002-8311-9976
Amy Xin Wei ZhangOntario Institute for Cancer Research, Toronto, Ontario, Canada.
Andrea ArrudaPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Shivapriya ChithambaramPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Stephanie M DobsonPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Amanda KhooPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Shahbaz KhanPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Narmin IbrahimovaPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Ann GeorgePrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Anne TierensPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.ORCID 0000-0002-5350-8313
Johann HitzlerThe Hospital for Sick Children, Toronto, Ontario, Canada.ORCID 0000-0003-1158-186X
Thomas KislingerPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.ORCID 0000-0003-3525-5540
John E DickPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
John D McPhersonOntario Institute for Cancer Research, Toronto, Ontario, Canada.ORCID 0000-0001-8049-9347
Mark D MindenPrincess Margaret Cancer Centre, Toronto, Ontario, Canada.
Faiyaz NottaPrincess Margaret Cancer Centre, Toronto, Ontario, Canada. faiyaz.notta@gmail.com.ORCID 0000-0002-5748-3985

Funding

CIHR 294582
6 · The paper itself

Abstract

In BCR-ABL1 lymphoblastic leukemia, treatment heterogeneity to tyrosine kinase inhibitors (TKIs), especially in the absence of kinase domain mutations in BCR-ABL1, is poorly understood. Through deep molecular profiling, we uncovered three transcriptomic subtypes of BCR-ABL1 lymphoblastic leukemia, each representing a maturation arrest at a stage of B-cell progenitor differentiation. An earlier arrest was associated with lineage promiscuity, treatment refractoriness and poor patient outcomes. A later arrest was associated with lineage fidelity, durable leukemia remissions and improved patient outcomes. Each maturation arrest was marked by specific genomic events that control different transition points in B-cell development. Interestingly, these events were absent in BCR-ABL1

Indexed as

Fusion Proteins, bcr-ablPrecursor Cell Lymphoblastic Leukemia-LymphomaCell DifferentiationGene Expression ProfilingHumansProtein Kinase InhibitorsTranscriptomeFusion Proteins, bcr-ablProtein Kinase Inhibitors

Identifiers

PMID37337105
PMCPMC10335939

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.