Evidence map›Paper›PMID 37336876›Full record

ArticleNature communications2023

Activating hidden signals by mimicking cryptic sites in a synthetic extracellular matrix.

Yumeng Zhu, Yulia Shmidov, Elizabeth A Harris, Michelle H Theus, Ronit Bitton, John B Matson

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yumeng Zhu *Department of Chemistry and Macromolecules Innovation Institute, Virginia Tech, Blacksburg, VA, USA.ORCID 0000-0002-3727-3008
Yulia Shmidov *Department of Chemical Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel.ORCID 0000-0003-4152-0670
Elizabeth A HarrisDepartment of Biomedical Sciences and Pathobiology, Virginia Tech, Blacksburg, VA, USA.ORCID 0000-0002-3924-6097
Michelle H TheusDepartment of Biomedical Sciences and Pathobiology, Virginia Tech, Blacksburg, VA, USA.ORCID 0000-0001-6485-2104
Ronit BittonDepartment of Chemical Engineering, Ben-Gurion University of the Negev, Beer-Sheva, Israel. rbitton@bgu.ac.il.ORCID 0000-0001-9601-9926
John B MatsonDepartment of Chemistry and Macromolecules Innovation Institute, Virginia Tech, Blacksburg, VA, USA. jbmatson@vt.edu.ORCID 0000-0001-7984-5396

Funding

Delivery of H2S: Supramolecular and Enzyme-Triggered Strategies for Controlled ReleaseR01GM123508 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI MATSON, JOHN B · 2017 to 2021
$1.6M
NIGMS NIH HHS R01 GM123508
6 · The paper itself

Abstract

Cryptic sites are short signaling peptides buried within the native extracellular matrix (ECM). Enzymatic cleavage of an ECM protein reveals these hidden peptide sequences, which interact with surface receptors to control cell behavior. Materials that mimic this dynamic interplay between cells and their surroundings via cryptic sites could enable application of this endogenous signaling phenomenon in synthetic ECM hydrogels. We demonstrate that depsipeptides ("switch peptides") can undergo enzyme-triggered changes in their primary sequence, with proof-of-principle studies showing how trypsin-triggered primary sequence rearrangement forms the bioadhesive pentapeptide YIGSR. We then engineered cryptic site-mimetic synthetic ECM hydrogels that experienced a cell-initiated gain of bioactivity. Responding to the endothelial cell surface enzyme aminopeptidase N, the inert matrix transformed into an adhesive synthetic ECM capable of supporting endothelial cell growth. This modular system enables dynamic reciprocity in synthetic ECMs, reproducing the natural symbiosis between cells and their matrix through inclusion of tunable hidden signals.

Indexed as

Extracellular MatrixPeptidesEndothelial CellsExtracellular Matrix ProteinsHydrogelsExtracellular Matrix ProteinsHydrogelsPeptides

Identifiers

PMID37336876
PMCPMC10279755

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.