ArticleMolecular genetics and genomics : MGG2023
Acidobacteria members harbour an abundant and diverse carbohydrate-active enzymes (cazyme) and secreted proteasome repertoire, key factors for potential efficient biomass degradation.
Article in Molecular genetics and genomics : MGG, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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10 citing papers in PubMed.
- Integrated Multi-Omics Analyses Reveal the Effects of Different Diets on Growth, Digestion, and Intestinal Function in Megalobrama Pellegrini Larvae.Marine biotechnology (New York, N.Y.) · 2026Article
- Effects of light intensity on the Panax quinquefolius L. growth and soil microbial communities under reduced light spatial heterogeneity: an application to agroforestry systems.BMC plant biology · 2026Article
- Divergent Soil Aggregate Stability Despite Similar Organic Carbon Gains Under Long-Term Maize Intercropping with Different Legume Cover Crops.Microorganisms · 2026Article
- Functionally distinct core microbes of Tricholoma matsutake revealed by cross-study analysis.Microbiome · 2026Article
- Hidden Partners in Diversity: Acidobacteriota and Their Distribution in the Cape Floristic Region.MicrobiologyOpen · 2026Article
- The prevalence and distribution ofFrontiers in microbiomes · 2026Article
- From cultivation challenges of Acidobacteriota to biotechnological promises - unveiling what is needed to fully harness their potential.World journal of microbiology & biotechnology · 2025Review
- Tunturi virus isolates and metagenome-assembled viral genomes provide insights into the virome of Acidobacteriota in Arctic tundra soils.Microbiome · 2025Article
- Article
- Degradation of lignocellulose by different bacterial and fungal co-cultures.Current research in microbial sciences · 2024Article
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2 authors.
Funding
Abstract
The Acidobacteria phylum is a very abundant group (20-30% of microbial communities in soil ecosystems); however, little is known about these microorganisms and their ability to degrade the biomass and lignocellulose due to the difficulty of culturing them. We, therefore, bioinformatically studied the content of lignocellulolytic enzymes (total and predicted secreted enzymes) and secreted peptidases in an in silico library containing 41 Acidobacteria genomes. The results showed a high abundance and diversity of total and secreted Carbohydrate-Active enzymes (cazyme) families among the Acidobacteria compared to known previous degraders. Indeed, the relative abundance of cazymes in some genomes represented more than 6% of the gene coding proteins with at least 300 cazymes. The same observation was made with the predicted secreted peptidases with several families of secreted peptidases, which represented at least 1.5% of the gene coding proteins in several genomes. These results allowed us to highlight the lignocellulolytic potential of the Acidobacteria phylum in the degradation of lignocellulosic biomass, which could explain its high abundance in the environment.
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