Evidence map›Paper›PMID 37333645›Full record

ArticleFrontiers in microbiology2023

Complete genome sequence of biocontrol strain

Linyan Xie, Lufeng Liu, Yanju Luo, Xibing Rao, Yining Di, Han Liu, Zhenfeng Qian, Qingqing Shen, Lilian He, Fusheng Li

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
7.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Foods (Basel, Switzerland) · 2026
    Article
  2. T2TJournal of fungi (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Genomic characterization ofFrontiers in microbiology · 2026
    Article
  5. Complete Genome Sequencing ofMicroorganisms · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Characterization ofFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Linyan XieCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Lufeng LiuCollege of Resources and Environment, Yunnan Agricultural University, Kunming, China.
Yanju LuoCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Xibing RaoCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Yining DiCollege of Resources and Environment, Yunnan Agricultural University, Kunming, China.
Han LiuCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Zhenfeng QianCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Qingqing ShenCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Lilian HeCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Fusheng LiCollege of Agronomy and Biotechnology, Yunnan Agricultural University, Kunming, China.
Yunnan Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Sugarcane is one of the most important sugar crops worldwide, however, sugarcane production is seriously limited by sugarcane red rot, a soil-borne disease caused by Methods: In this study, the genome of YC89 strain was sequenced, its genome structure and function were analyzed using various bioinformatics software, and its genome was compared with those of other homologous strains. In addition, the effectiveness of YC89 against sugarcane red rot and the evaluation of sugarcane plant growth promotion were also investigated by pot experiments. Results: Here, we present the complete genome sequence of YC89, which consists of a 3.95 Mb circular chromosome with an average GC content of 46.62%. The phylogenetic tree indicated that YC89 is closely related to Discussion: These findings will be helpful for further studies on the mechanisms of plant growth promotion and biocontrol by

Indexed as

Bacillus velezensisbiocontrolbiocontrol mechanismgenome sequencingsugarcane red rot

Identifiers

PMID37333645
PMCPMC10275611
OpenAlexW4379141715

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.