Evidence map›Paper›PMID 37333441›Full record

ArticleFEMS microbes2023

Direct wastewater extraction as a simple and effective method for SARS-CoV-2 surveillance and COVID-19 community-level monitoring.

Megan E J Lott, William A Norfolk, Cody A Dailey, Amelia M Foley, Carolina Melendez-Declet, Megan J Robertson, Stephen L Rathbun, Erin K Lipp

Open access · goldAbstract read
In one paragraph

Article in FEMS microbes, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it, 13 citations in OpenAlex.

  1. Pooled it
  2. Comparing Wastewater-Based and Case-BasedEpidemiology and infection · 2026
    Article
  3. Article
  4. Good Ethical and Laboratory Practices for Wastewater Surveillance.Water environment research : a research publication of the Water Environment Federation · 2025
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Megan E J LottDepartment of Environmental Health Science, University of Georgia, 150 East Green Street, Athens, GA 30602, United States.ORCID https://orcid.org/0000-0003-0311-6327
William A NorfolkDepartment of Environmental Health Science, University of Georgia, 150 East Green Street, Athens, GA 30602, United States.ORCID https://orcid.org/0000-0002-3927-0361
Cody A DaileyDepartment of Epidemiology and Biostatistics, University of Georgia, 101 Buck Road, Athens, GA 30606, United States.ORCID https://orcid.org/0000-0002-2611-4407
Amelia M FoleyDepartment of Environmental Health Science, University of Georgia, 150 East Green Street, Athens, GA 30602, United States.ORCID https://orcid.org/0000-0002-0978-6324
Carolina Melendez-DecletDepartment of Environmental Health Science, University of Georgia, 150 East Green Street, Athens, GA 30602, United States.ORCID https://orcid.org/0000-0002-8679-5312
Megan J RobertsonDepartment of Environmental Health Science, University of Georgia, 150 East Green Street, Athens, GA 30602, United States.ORCID https://orcid.org/0000-0002-0866-7278
Stephen L RathbunDepartment of Epidemiology and Biostatistics, University of Georgia, 101 Buck Road, Athens, GA 30606, United States.ORCID https://orcid.org/0000-0002-4704-5316
Erin K LippDepartment of Environmental Health Science, University of Georgia, 150 East Green Street, Athens, GA 30602, United States.ORCID https://orcid.org/0000-0002-8066-0636
University of Georgia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Wastewater surveillance has proven to be an effective tool to monitor the transmission and emergence of infectious agents at a community scale. Workflows for wastewater surveillance generally rely on concentration steps to increase the probability of detection of low-abundance targets, but preconcentration can substantially increase the time and cost of analyses while also introducing additional loss of target during processing. To address some of these issues, we conducted a longitudinal study implementing a simplified workflow for SARS-CoV-2 detection from wastewater, using a direct column-based extraction approach. Composite influent wastewater samples were collected weekly for 1 year between June 2020 and June 2021 in Athens-Clarke County, Georgia, USA. Bypassing any concentration step, low volumes (280 µl) of influent wastewater were extracted using a commercial kit, and immediately analyzed by RT-qPCR for the SARS-CoV-2 N1 and N2 gene targets. SARS-CoV-2 viral RNA was detected in 76% (193/254) of influent samples, and the recovery of the surrogate bovine coronavirus was 42% (IQR: 28%, 59%). N1 and N2 assay positivity, viral concentration, and flow-adjusted daily viral load correlated significantly with per-capita case reports of COVID-19 at the county-level (ρ = 0.69-0.82). To compensate for the method's high limit of detection (approximately 10

Indexed as

COVID-19direct extractionRT-qPCRSARS-CoV-2wastewater-based epidemiologywastewater surveillance

Identifiers

PMID37333441
PMCPMC10117872
OpenAlexW4315709242

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.