Evidence map›Paper›PMID 37333363›Full record

ArticlebioRxiv : the preprint server for biology2024

An efficient behavioral screening platform classifies natural products and other chemical cues according to their chemosensory valence in

Emily Fryer, Sujay Guha, Lucero E Rogel-Hernandez, Theresa Logan-Garbisch, Hodan Farah, Ehsan Rezaei, Iris N Mollhoff, Adam L Nekimken, Angela Xu, Lara Selin Seyahi and 5 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Emily FryerDepartment of Plant Biology, Carnegie Institution for Science.ORCID 0000-0003-4152-3652
Sujay GuhaDepartment of Molecular and Cellular Physiology, Stanford University.ORCID 0009-0006-3910-7691
Lucero E Rogel-HernandezDepartment of Molecular and Cellular Physiology, Stanford University.ORCID 0000-0001-7361-0545
Theresa Logan-GarbischDepartment of Molecular and Cellular Physiology, Stanford University.ORCID 0000-0002-0187-977X
Hodan FarahDepartment of Plant Biology, Carnegie Institution for Science.ORCID 0009-0001-5150-2153
Ehsan RezaeiDepartment of Molecular and Cellular Physiology, Stanford University.ORCID 0000-0002-7469-141X
Iris N MollhoffDepartment of Plant Biology, Carnegie Institution for Science.ORCID 0000-0002-5298-2902
Adam L NekimkenDepartment of Molecular and Cellular Physiology, Stanford University.ORCID 0000-0002-6802-6069
Angela XuDepartment of Plant Biology, Carnegie Institution for Science.ORCID 0000-0002-4583-950X
Lara Selin SeyahiDepartment of Plant Biology, Carnegie Institution for Science.ORCID 0000-0001-6136-1940
Sylvia FechnerDepartment of Molecular and Cellular Physiology, Stanford University.ORCID 0000-0003-4440-6611
Shaul DruckmannDepartment of Neurobiology, Stanford University.ORCID 0000-0003-0068-3377
Thomas R ClandininDepartment of Neurobiology, Stanford University.ORCID 0000-0001-6277-6849
Seung Y RheeDepartment of Plant Biology, Carnegie Institution for Science.ORCID 0000-0002-7572-4762
Miriam B GoodmanDepartment of Molecular and Cellular Physiology, Stanford University.ORCID 0000-0002-5810-1272

Funding

Training Program in Basic NeuroscienceT32MH020016 · NIMH · STANFORD UNIVERSITY · PI Justin L Gardner, Merritt C Maduke · 1997 to 2026
$16.2M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
The biophysics of skin-neuron sensory tactile organs and their sensitivity to mechanical and chemical stressR35NS105092 · NINDS · STANFORD UNIVERSITY · PI GOODMAN, MIRIAM B · 2018 to 2025
$6.4M
Molecular Pharmacology Training GrantT32GM113854 · NIGMS · STANFORD UNIVERSITY · PI MOCHLY-ROSEN, DARIA · 2015 to 2019
$1.1M
Internal Tissue Mechanics and the Sense of Touch in C. elegansF31NS100318 · NINDS · STANFORD UNIVERSITY · PI NEKIMKEN, ADAM · 2017 to 2019
$106k
DIFFERENTIATION OF NEURAL CRESTF32NS010502 · NINDS · UNIVERSITY OF WASHINGTON · PI DORSKY, RICHARD I · 1998 to 1998
–
NIGMS NIH HHS T32 GM113854NIH HHS P40 OD010440NIMH NIH HHS T32 MH020016NINDS NIH HHS F31 NS100318NINDS NIH HHS F32 NS010502NINDS NIH HHS R35 NS105092
6 · The paper itself

Abstract

Throughout history, humans have relied on plants as a source of medication, flavoring, and food. Plants synthesize large chemical libraries and release many of these compounds into the rhizosphere and atmosphere where they affect animal and microbe behavior. To survive, nematodes must have evolved the sensory capacity to distinguish plant-made small molecules (SMs) that are harmful and must be avoided from those that are beneficial and should be sought. This ability to classify chemical cues as a function of their value is fundamental to olfaction, and represents a capacity shared by many animals, including humans. Here, we present an efficient platform based on multi-well plates, liquid handling instrumentation, inexpensive optical scanners, and bespoke software that can efficiently determine the valence (attraction or repulsion) of single SMs in the model nematode,

Identifiers

PMID37333363
PMCPMC10274637

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.